Application of Bayesian genomic prediction methods to genome-wide association analyses

A Wolc, JCM Dekkers - Genetics Selection Evolution, 2022 - Springer
Background Bayesian genomic prediction methods were developed to simultaneously fit all
genotyped markers to a set of available phenotypes for prediction of breeding values for …

Vetinformatics from functional genomics to drug discovery: insights into decoding complex molecular mechanisms of livestock systems in veterinary science

RK Pathak, JM Kim - Frontiers in Veterinary Science, 2022 - frontiersin.org
Having played important roles in human growth and development, livestock animals are
regarded as integral parts of society. However, industrialization has depleted natural …

Sequence variants associated with resilient responses in growing pigs

H Laghouaouta, M Laplana… - Journal of Animal …, 2024 - Wiley Online Library
The current work aimed to identify genomic regions and candidate genes associated with
resilience in pigs. In previous work, we proposed the body weight deviation from the …

Identification of the genetic basis of sow pelvic organ prolapse

V Bhatia, T Stevens, MFL Derks, J Dunkelberger… - Frontiers in …, 2023 - frontiersin.org
Introduction: Pelvic organ prolapse (POP) is one contributor to recent increases in sow
mortality that have been observed in some populations and environments, leading to …

Capturing resilience from phenotypic deviations: a case study using feed consumption and whole genome data in pigs

E Mancin, C Maltecca, J Jiang, YJ Huang, F Tiezzi - BMC genomics, 2024 - Springer
Background In recent years, interest has grown in quantifying resilience in livestock by
examining deviations in target phenotypes. This method is based on the idea that variability …

Ascertaining the genetic background of the Celtic‐Iberian pig strain: A signatures of selection approach

KD Arias, H Lee, R Bozzi, I Álvarez… - Journal of Animal …, 2024 - Wiley Online Library
Celtic‐Iberian pig breeds were majority in Spain and Portugal until the first half of the 20th
century. In the 1990s, they were nearly extinct as a result of the introduction of foreign …

[HTML][HTML] Selection for Resilience in Livestock Production Systems

H Laghouaouta, LJ Fraile, RN Pena - International Journal of Molecular …, 2024 - mdpi.com
Selective breeding for improved animal resilience is becoming critical to increase the
sustainability of production systems. Despite the existence of a genetic component for …

[HTML][HTML] Genetic analysis of milk citrate predicted by milk mid-infrared spectra of Holstein cows in early lactation

Y Chen, H Hu, H Atashi, C Grelet, K Wijnrocx… - Journal of Dairy …, 2024 - Elsevier
Milk citrate is regarded as an early biomarker of negative energy balance in dairy cows
during early lactation and serves as a suitable candidate phenotype for genomic selection …

Genome-wide Association Studies of Novel Resilience Traits Identify Important Immune QTL Regions and Candidate Genes in Duroc Pigs

M Li, L Pu, DE MacHugh, J Tian, X Wang… - Journal of Integrative …, 2024 - Elsevier
Resilience traits in pig populations allow animals to deal better with infectious disease and
suboptimal production environments. The data on daily weight, feed intake and feed …

Maintaining Data Confidentiality in Collaborative Genomic Analyses Using Encrypted Genotypes and Phenotypes on Disease Resilience in Pigs

D Li - 2024 - search.proquest.com
Genome-to-phenome analyses in animal breeding often involves the estimation of genetic
marker effects and breeding values, based on individual-level genotype and phenotype …