Metagenomics methods for the study of plant-associated microbial communities: a review
AE Fadiji, OO Babalola - Journal of microbiological methods, 2020 - Elsevier
Plant microbiota have different effects on the plant which can be beneficial or pathogenic. In
this study, we concentrated on beneficial microbes associated with plants using endophytic …
this study, we concentrated on beneficial microbes associated with plants using endophytic …
“Omics” tools for better understanding the plant–endophyte interactions
S Kaul, T Sharma, M K. Dhar - Frontiers in plant science, 2016 - frontiersin.org
Endophytes, which mostly include bacteria, fungi and actinomycetes, are the endosymbionts
that reside asymptomatically in plants for at least a part of their life cycle. They have …
that reside asymptomatically in plants for at least a part of their life cycle. They have …
Identification of viruses and viroids by next-generation sequencing and homology-dependent and homology-independent algorithms
Q Wu, SW Ding, Y Zhang, S Zhu - Annual review of …, 2015 - annualreviews.org
A fast, accurate, and full indexing of viruses and viroids in a sample for the inspection and
quarantine services and disease management is desirable but was unrealistic until recently …
quarantine services and disease management is desirable but was unrealistic until recently …
Non-coding RNAs in legumes: their emerging roles in regulating biotic/abiotic stress responses and plant growth and development
Noncoding RNAs, including microRNAs (miRNAs), small interference RNAs (siRNAs),
circular RNA (circRNA), and long noncoding RNAs (lncRNAs), control gene expression at …
circular RNA (circRNA), and long noncoding RNAs (lncRNAs), control gene expression at …
Bacterial pathogenesis of plants: future challenges from a microbial perspective: challenges in bacterial molecular plant pathology
S Pfeilmeier, DL Caly, JG Malone - Molecular plant pathology, 2016 - Wiley Online Library
Summary Future Challenges in Plant Pathology Plant infection is a complicated process. On
encountering a plant, pathogenic microorganisms must first adapt to life on the epiphytic …
encountering a plant, pathogenic microorganisms must first adapt to life on the epiphytic …
Impact of metagenomic DNA extraction procedures on the identifiable endophytic bacterial diversity in Sorghum bicolor (L. Moench)
MKA Maropola, JB Ramond, M Trindade - Journal of Microbiological …, 2015 - Elsevier
Culture-independent studies rely on the quantity and quality of the extracted environmental
metagenomic DNA (mDNA). To fully access the plant tissue microbiome, the extracted plant …
metagenomic DNA (mDNA). To fully access the plant tissue microbiome, the extracted plant …
Microbial community dynamics and response to plant growth-promoting microorganisms in the rhizosphere of four common food crops cultivated in hydroponics
C Sheridan, P Depuydt, M De Ro, C Petit… - Microbial ecology, 2017 - Springer
Plant growth promoting microorganisms (PGPMs) of the plant root zone microbiome have
received limited attention in hydroponic cultivation systems. In the framework of a project …
received limited attention in hydroponic cultivation systems. In the framework of a project …
Multidimensional approaches for studying plant defence against insects: from ecology to omics and synthetic biology
The biggest challenge for modern biology is to integrate multidisciplinary approaches
towards understanding the organizational and functional complexity of biological systems at …
towards understanding the organizational and functional complexity of biological systems at …
'Omics' tools in soil microbiology: the state of the art
R Biswas, A Sarkar - Advances in Soil Microbiology: Recent Trends and …, 2018 - Springer
The soil being the most heterogeneous substance hosts the dynamic environments for
diverse microorganisms. Traditional techniques are limited to explore only few portion of …
diverse microorganisms. Traditional techniques are limited to explore only few portion of …
micro RNA 172 (miR172) signals epidermal infection and is expressed in cells primed for bacterial invasion in Lotus japonicus roots and nodules
Legumes interact with rhizobial bacteria to form nitrogen‐fixing root nodules. Host signalling
following mutual recognition ensures a specific response, but is only partially understood …
following mutual recognition ensures a specific response, but is only partially understood …