The bioinformatics toolbox for circRNA discovery and analysis
Circular RNAs (circRNAs) are a unique class of RNA molecule identified more than 40 years
ago which are produced by a covalent linkage via back-splicing of linear RNA. Recent …
ago which are produced by a covalent linkage via back-splicing of linear RNA. Recent …
Updated review of advances in microRNAs and complex diseases: experimental results, databases, webservers and data fusion
MicroRNAs (miRNAs) are gene regulators involved in the pathogenesis of complex
diseases such as cancers, and thus serve as potential diagnostic markers and therapeutic …
diseases such as cancers, and thus serve as potential diagnostic markers and therapeutic …
miRTarBase 2020: updates to the experimentally validated microRNA–target interaction database
MicroRNAs (miRNAs) are small non-coding RNAs (typically consisting of 18–25
nucleotides) that negatively control expression of target genes at the post-transcriptional …
nucleotides) that negatively control expression of target genes at the post-transcriptional …
HMDD v2. 0: a database for experimentally supported human microRNA and disease associations
Abstract The Human microRNA Disease Database (HMDD; available via the Web site at
http://cmbi. bjmu. edu. cn/hmdd and http://202.38. 126.151/hmdd/tools/hmdd2. html) is a …
http://cmbi. bjmu. edu. cn/hmdd and http://202.38. 126.151/hmdd/tools/hmdd2. html) is a …
Interaction and cross-talk between non-coding RNAs
S Yamamura, M Imai-Sumida, Y Tanaka… - Cellular and molecular …, 2018 - Springer
Non-coding RNA (ncRNA) has been shown to regulate diverse cellular processes and
functions through controlling gene expression. Long non-coding RNAs (lncRNAs) act as a …
functions through controlling gene expression. Long non-coding RNAs (lncRNAs) act as a …
PolymiRTS Database 3.0: linking polymorphisms in microRNAs and their target sites with human diseases and biological pathways
Poly morphisms in mi cro R NAs (miRNAs) and their t arget s ites (PolymiRTS) are known to
disrupt miRNA function, leading to the development of disease and variation in physiological …
disrupt miRNA function, leading to the development of disease and variation in physiological …
Bioinformatic tools for microRNA dissection
Recently, microRNAs (miRNAs) have emerged as important elements of gene regulatory
networks. MiRNAs are endogenous single-stranded non-coding RNAs (∼ 22-nt long) that …
networks. MiRNAs are endogenous single-stranded non-coding RNAs (∼ 22-nt long) that …
The untranslated regions of mRNAs in cancer
SL Schuster, AC Hsieh - Trends in cancer, 2019 - cell.com
The 5′ and 3′ untranslated regions (UTRs) regulate crucial aspects of post-transcriptional
gene regulation that are necessary for the maintenance of cellular homeostasis. When these …
gene regulation that are necessary for the maintenance of cellular homeostasis. When these …
CAP-miRSeq: a comprehensive analysis pipeline for microRNA sequencing data
Background miRNAs play a key role in normal physiology and various diseases. miRNA
profiling through next generation sequencing (miRNA-seq) has become the main platform …
profiling through next generation sequencing (miRNA-seq) has become the main platform …
OncomiRDB: a database for the experimentally verified oncogenic and tumor-suppressive microRNAs
MicroRNAs (miRNAs), a class of small regulatory RNAs, play important roles in cancer
initiation, progression and therapy. MiRNAs are found to regulate diverse cancer-related …
initiation, progression and therapy. MiRNAs are found to regulate diverse cancer-related …