Synthetic biology—the synthesis of biology

S Ausländer, D Ausländer… - Angewandte Chemie …, 2017 - Wiley Online Library
Synthetic biology concerns the engineering of man‐made living biomachines from
standardized components that can perform predefined functions in a (self‐) controlled …

Controlling allosteric networks in proteins

NV Dokholyan - Chemical reviews, 2016 - ACS Publications
Allosteric transition, defined as conformational changes induced by ligand binding, is one of
the fundamental properties of proteins. Allostery has been observed and characterized in …

De novo design of bioactive protein switches

RA Langan, SE Boyken, AH Ng, JA Samson, G Dods… - Nature, 2019 - nature.com
Allosteric regulation of protein function is widespread in biology, but is challenging for de
novo protein design as it requires the explicit design of multiple states with comparable free …

Engineering an allosteric transcription factor to respond to new ligands

ND Taylor, AS Garruss, R Moretti, S Chan, MA Arbing… - Nature …, 2016 - nature.com
Genetic regulatory proteins inducible by small molecules are useful synthetic biology tools
as sensors and switches. Bacterial allosteric transcription factors (aTFs) are a major class of …

[图书][B] An introduction to systems biology: design principles of biological circuits

U Alon - 2019 - api.taylorfrancis.com
Praise for the first edition:… superb, beautifully written and organized work that takes an
engineering approach to systems biology. Alon provides nicely written appendices to …

Genetically encoded sensors enable real-time observation of metabolite production

JK Rogers, GM Church - Proceedings of the National …, 2016 - National Acad Sciences
Engineering cells to produce valuable metabolic products is hindered by the slow and
laborious methods available for evaluating product concentration. Consequently, many …

SPRINT: a Cas13a-based platform for detection of small molecules

RS Iwasaki, RT Batey - Nucleic Acids Research, 2020 - academic.oup.com
Recent efforts in biological engineering have made detection of nucleic acids in samples
more rapid, inexpensive and sensitive using CRISPR-based approaches. We expand one of …

Structural hierarchy controlling dimerization and target DNA recognition in the AHR transcriptional complex

SH Seok, W Lee, L Jiang, K Molugu… - Proceedings of the …, 2017 - National Acad Sciences
The aryl hydrocarbon receptor (AHR) belongs to the PAS (PER-ARNT-SIM) family
transcription factors and mediates broad responses to numerous environmental pollutants …

Tailor-made transcriptional biosensors for optimizing microbial cell factories

B De Paepe, G Peters, P Coussement… - Journal of Industrial …, 2017 - academic.oup.com
Monitoring cellular behavior and eventually properly adapting cellular processes is key to
handle the enormous complexity of today's metabolic engineering questions. Hence …

ASD v3. 0: unraveling allosteric regulation with structural mechanisms and biological networks

Q Shen, G Wang, S Li, X Liu, S Lu, Z Chen… - Nucleic acids …, 2016 - academic.oup.com
Allosteric regulation, the most direct and efficient way of regulating protein function, is
induced by the binding of a ligand at one site that is topographically distinct from an …