[HTML][HTML] Microsatellite markers: what they mean and why they are so useful

MLC Vieira, L Santini, AL Diniz… - Genetics and molecular …, 2016 - SciELO Brasil
Abstract Microsatellites or Single Sequence Repeats (SSRs) are extensively employed in
plant genetics studies, using both low and high throughput genotyping approaches …

Challenges in analysis and interpretation of microsatellite data for population genetic studies

AI Putman, I Carbone - Ecology and evolution, 2014 - Wiley Online Library
Advancing technologies have facilitated the ever‐widening application of genetic markers
such as microsatellites into new systems and research questions in biology. In light of the …

Current trends in microsatellite genotyping

E Guichoux, L Lagache, S Wagner… - Molecular ecology …, 2011 - Wiley Online Library
Microsatellites have been popular molecular markers ever since their advent in the late
eighties. Despite growing competition from new genotyping and sequencing techniques, the …

Using next‐generation sequencing approaches to isolate simple sequence repeat (SSR) loci in the plant sciences

JE Zalapa, H Cuevas, H Zhu, S Steffan… - American journal of …, 2012 - Wiley Online Library
The application of next‐generation sequencing (NGS) technologies for the development of
simple sequence repeat (SSR) or microsatellite loci for genetic research in the botanical …

Time‐dependent rates of molecular evolution

SYW Ho, R Lanfear, L Bromham, MJ Phillips… - Molecular …, 2011 - Wiley Online Library
For over half a century, it has been known that the rate of morphological evolution appears
to vary with the time frame of measurement. Rates of microevolutionary change, measured …

Mining and development of novel SSR markers using next generation sequencing (NGS) data in plants

S Taheri, T Lee Abdullah, MR Yusop, MM Hanafi… - Molecules, 2018 - mdpi.com
Microsatellites, or simple sequence repeats (SSRs), are one of the most informative and
multi-purpose genetic markers exploited in plant functional genomics. However, the …

The landscape of human STR variation

T Willems, M Gymrek, G Highnam, D Mittelman… - Genome …, 2014 - genome.cshlp.org
Short tandem repeats are among the most polymorphic loci in the human genome. These
loci play a role in the etiology of a range of genetic diseases and have been frequently …

Division of labor at the eukaryotic replication fork

SAN McElhinny, DA Gordenin, CM Stith, PMJ Burgers… - Molecular cell, 2008 - cell.com
DNA polymerase δ (Pol δ) and DNA polymerase ɛ (Pol ɛ) are both required for efficient
replication of the nuclear genome, yet the division of labor between these enzymes has …

Fast, cost-effective development of species-specific microsatellite markers by genomic sequencing

J Abdelkrim, BC Robertson, JAL Stanton… - …, 2009 - Taylor & Francis
Microsatellites are the genetic markers of choice for many population genetic studies, but
must be isolated de novo using recombinant approaches where prior genetic data are …

Rapid microsatellite identification from Illumina paired-end genomic sequencing in two birds and a snake

TA Castoe, AW Poole, APJ De Koning, KL Jones… - PloS one, 2012 - journals.plos.org
Identification of microsatellites, or simple sequence repeats (SSRs), can be a time-
consuming and costly investment requiring enrichment, cloning, and sequencing of …