Establishment of H3K9-methylated heterochromatin and its functions in tissue differentiation and maintenance
Heterochromatin is characterized by dimethylated or trimethylated histone H3 Lys9
(H3K9me2 or H3K9me3, respectively) and is found at transposable elements, satellite …
(H3K9me2 or H3K9me3, respectively) and is found at transposable elements, satellite …
[HTML][HTML] The human transcription factors
Transcription factors (TFs) recognize specific DNA sequences to control chromatin and
transcription, forming a complex system that guides expression of the genome. Despite keen …
transcription, forming a complex system that guides expression of the genome. Despite keen …
Progressive Cactus is a multiple-genome aligner for the thousand-genome era
New genome assemblies have been arriving at a rapidly increasing pace, thanks to
decreases in sequencing costs and improvements in third-generation sequencing …
decreases in sequencing costs and improvements in third-generation sequencing …
Taming transposable elements in vertebrates: from epigenetic silencing to domestication
Transposable element (TE)-derived sequences are ubiquitous in most eukaryotic genomes
known to date. Because their expression and mobility can lead to genomic instability …
known to date. Because their expression and mobility can lead to genomic instability …
KRAB zinc-finger proteins contribute to the evolution of gene regulatory networks
M Imbeault, PY Helleboid, D Trono - Nature, 2017 - nature.com
The human genome encodes some 350 Krüppel-associated box (KRAB) domain-containing
zinc-finger proteins (KZFPs), the products of a rapidly evolving gene family that has been …
zinc-finger proteins (KZFPs), the products of a rapidly evolving gene family that has been …
Multiplexed genome engineering by Cas12a and CRISPR arrays encoded on single transcripts
The ability to modify multiple genetic elements simultaneously would help to elucidate and
control the gene interactions and networks underlying complex cellular functions. However …
control the gene interactions and networks underlying complex cellular functions. However …
KRAB zinc finger proteins
G Ecco, M Imbeault, D Trono - Development, 2017 - journals.biologists.com
Krüppel-associated box domain zinc finger proteins (KRAB-ZFPs) are the largest family of
transcriptional regulators in higher vertebrates. Characterized by an N-terminal KRAB …
transcriptional regulators in higher vertebrates. Characterized by an N-terminal KRAB …
Hominoid-specific transposable elements and KZFPs facilitate human embryonic genome activation and control transcription in naive human ESCs
Expansion of transposable elements (TEs) coincides with evolutionary shifts in gene
expression. TEs frequently harbor binding sites for transcriptional regulators, thus enabling …
expression. TEs frequently harbor binding sites for transcriptional regulators, thus enabling …
An evolutionary arms race between KRAB zinc-finger genes ZNF91/93 and SVA/L1 retrotransposons
Throughout evolution primate genomes have been modified by waves of retrotransposon
insertions,,. For each wave, the host eventually finds a way to repress retrotransposon …
insertions,,. For each wave, the host eventually finds a way to repress retrotransposon …
SubCellBarCode: proteome-wide mapping of protein localization and relocalization
Subcellular localization is a main determinant of protein function; however, a global view of
cellular proteome organization remains relatively unexplored. We have developed a robust …
cellular proteome organization remains relatively unexplored. We have developed a robust …