Hepatitis B virus genotypes: comparison of genotyping methods
A Bartholomeusz, S Schaefer - Reviews in medical virology, 2004 - Wiley Online Library
There are eight genotypes of HBV designated A to H based on greater than 8% nucleotide
variation over the entire genome. Hepadnaviruses infecting primates like the chimpanzee …
variation over the entire genome. Hepadnaviruses infecting primates like the chimpanzee …
Impact of genomics on the understanding of microbial evolution and classification: the importance of Darwin's views on classification
RS Gupta - FEMS microbiology reviews, 2016 - academic.oup.com
Analyses of genome sequences, by some approaches, suggest that the widespread
occurrence of horizontal gene transfers (HGTs) in prokaryotes disguises their evolutionary …
occurrence of horizontal gene transfers (HGTs) in prokaryotes disguises their evolutionary …
A diverse group of previously unrecognized human rhinoviruses are common causes of respiratory illnesses in infants
WM Lee, C Kiesner, T Pappas, I Lee, K Grindle, T Jartti… - PloS one, 2007 - journals.plos.org
Background Human rhinoviruses (HRVs) are the most prevalent human pathogens, and
consist of 101 serotypes that are classified into groups A and B according to sequence …
consist of 101 serotypes that are classified into groups A and B according to sequence …
Identifying HIV-1 dual infections
AC Van der Kuyl, M Cornelissen - Retrovirology, 2007 - Springer
Transmission of human immunodeficiency virus (HIV) is no exception to the phenomenon
that a second, productive infection with another strain of the same virus is feasible …
that a second, productive infection with another strain of the same virus is feasible …
Alignment-free distance measure based on return time distribution for sequence analysis: applications to clustering, molecular phylogeny and subtyping
P Kolekar, M Kale, U Kulkarni-Kale - Molecular phylogenetics and evolution, 2012 - Elsevier
The data deluge in post-genomic era demands development of novel data mining tools.
Existing molecular phylogeny analyses (MPAs) developed for individual gene/protein …
Existing molecular phylogeny analyses (MPAs) developed for individual gene/protein …
Neurological manifestations of human parvovirus B19 infection
F Barah, PJ Vallely, GM Cleator… - Reviews in medical …, 2003 - Wiley Online Library
Since its discovery, human parvovirus B19 has been linked with a broad spectrum of clinical
syndromes. An aetiological role for the virus has been confirmed in erythema infectiosum …
syndromes. An aetiological role for the virus has been confirmed in erythema infectiosum …
Genetic variants of parvovirus B19 identified in the United Kingdom: implications for diagnostic testing
BJ Cohen, J Gandhi, JP Clewley - Journal of clinical virology, 2006 - Elsevier
BACKGROUND: Discrepant results in diagnostic parvovirus B19 PCR assays have been
observed with strains showing nucleotide sequence variation. OBJECTIVES AND STUDY …
observed with strains showing nucleotide sequence variation. OBJECTIVES AND STUDY …
Phylogenetics
RD Sleator - Archives of microbiology, 2011 - Springer
The recent rapid expansion in the DNA and protein databases, arising from large-scale
genomic and metagenomic sequence projects, has forced significant development in the …
genomic and metagenomic sequence projects, has forced significant development in the …
Subtype-specific patterns in HIV Type 1 reverse transcriptase and protease in Oyo State, Nigeria: implications for drug resistance and host response
AI Ojesina, JL Sankalé, G Odaibo… - AIDS Research & …, 2006 - liebertpub.com
As the use of antiretroviral therapy becomes more widespread across Africa, it is imperative
to characterize baseline molecular variability and subtype-specific peculiarities of drug …
to characterize baseline molecular variability and subtype-specific peculiarities of drug …
Sequence variability of the α‐chemokine UL146 from clinical strains of human cytomegalovirus
AF Hassan‐Walker, S Okwuadi, L Lee… - Journal of medical …, 2004 - Wiley Online Library
Human cytomegalovirus (HCMV) is a ubiquitous pathogen that infects a variety of cell types
in vivo. A region (referred to as UL/b') present in the Toledo strain of HCMV and low passage …
in vivo. A region (referred to as UL/b') present in the Toledo strain of HCMV and low passage …