[HTML][HTML] Cytoplasmic RNA decay pathways-Enzymes and mechanisms
A Łabno, R Tomecki, A Dziembowski - Biochimica et Biophysica Acta (BBA) …, 2016 - Elsevier
RNA decay plays a crucial role in post-transcriptional regulation of gene expression. Work
conducted over the last decades has defined the major mRNA decay pathways, as well as …
conducted over the last decades has defined the major mRNA decay pathways, as well as …
Birth and death of histone mRNAs
WF Marzluff, KP Koreski - Trends in Genetics, 2017 - cell.com
In metazoans, histone mRNAs are not polyadenylated but end in a conserved stem-loop.
Stem-loop binding protein (SLBP) binds to the stem-loop and is required for all steps in …
Stem-loop binding protein (SLBP) binds to the stem-loop and is required for all steps in …
A tale of non-canonical tails: gene regulation by post-transcriptional RNA tailing
S Yu, VN Kim - Nature Reviews Molecular Cell Biology, 2020 - nature.com
RNA tailing, or the addition of non-templated nucleotides to the 3′ end of RNA, is the most
frequent and conserved type of RNA modification. The addition of tails and their composition …
frequent and conserved type of RNA modification. The addition of tails and their composition …
Measuring the tail: Methods for poly (A) tail profiling
A Brouze, PS Krawczyk… - Wiley Interdisciplinary …, 2023 - Wiley Online Library
Abstract The 3′‐end poly (A) tail is an important and potent feature of most mRNA
molecules that affects mRNA fate and translation efficiency. Polyadenylation is a …
molecules that affects mRNA fate and translation efficiency. Polyadenylation is a …
A mechanism for microRNA arm switching regulated by uridylation
Strand selection is a critical step in microRNA (miRNA) biogenesis. Although the dominant
strand may change depending on cellular contexts, the molecular mechanism and …
strand may change depending on cellular contexts, the molecular mechanism and …
UPFront and center in RNA decay: UPF1 in nonsense-mediated mRNA decay and beyond
Nonsense-mediated mRNA decay (NMD), which is arguably the best-characterized
translation-dependent regulatory pathway in mammals, selectively degrades mRNAs as a …
translation-dependent regulatory pathway in mammals, selectively degrades mRNAs as a …
Terminal uridylyltransferases execute programmed clearance of maternal transcriptome in vertebrate embryos
During the maternal-to-zygotic transition (MZT), maternal RNAs are actively degraded and
replaced by newly synthesized zygotic transcripts in a highly coordinated manner. However …
replaced by newly synthesized zygotic transcripts in a highly coordinated manner. However …
Histone supply: Multitiered regulation ensures chromatin dynamics throughout the cell cycle
S Mendiratta, A Gatto, G Almouzni - Journal of Cell Biology, 2019 - rupress.org
As the building blocks of chromatin, histones are central to establish and maintain particular
chromatin states associated with given cell fates. Importantly, histones exist as distinct …
chromatin states associated with given cell fates. Importantly, histones exist as distinct …
TENT2, TUT4, and TUT7 selectively regulate miRNA sequence and abundance
A Yang, X Bofill-De Ros, R Stanton, TJ Shao… - Nature …, 2022 - nature.com
TENTs generate miRNA isoforms by 3'tailing. However, little is known about how tailing
regulates miRNA function. Here, we generate isogenic HEK293T cell lines in which TENT2 …
regulates miRNA function. Here, we generate isogenic HEK293T cell lines in which TENT2 …
RNA uridylation: a key posttranscriptional modification shaping the coding and noncoding transcriptome
C De Almeida, H Scheer, H Zuber… - Wiley Interdisciplinary …, 2018 - Wiley Online Library
RNA uridylation is a potent and widespread posttranscriptional regulator of gene
expression. RNA uridylation has been detected in a range of eukaryotes including …
expression. RNA uridylation has been detected in a range of eukaryotes including …