Microbial structuring of marine ecosystems

F Azam, F Malfatti - Nature Reviews Microbiology, 2007 - nature.com
Despite the impressive advances that have been made in assessing the diversity of marine
microorganisms, the mechanisms that underlie the participation of microorganisms in marine …

Functional single-cell analyses: flow cytometry and cell sorting of microbial populations and communities

S Müller, G Nebe-von-Caron - FEMS Microbiology reviews, 2010 - academic.oup.com
The still poorly explored world of microbial functioning is about to be uncovered by a
combined application of old and new technologies. Bacteria, especially, are still in the dark …

[HTML][HTML] Xenobiotics shape the physiology and gene expression of the active human gut microbiome

CF Maurice, HJ Haiser, PJ Turnbaugh - Cell, 2013 - cell.com
The human gut contains trillions of microorganisms that influence our health by metabolizing
xenobiotics, including host-targeted drugs and antibiotics. Recent efforts have characterized …

Assessment and interpretation of bacterial viability by using the LIVE/DEAD BacLight Kit in combination with flow cytometry

M Berney, F Hammes, F Bosshard… - Applied and …, 2007 - Am Soc Microbiol
The commercially available LIVE/DEAD BacLight kit is enjoying increased popularity among
researchers in various fields of microbiology. Its use in combination with flow cytometry …

Monitoring microbiological changes in drinking water systems using a fast and reproducible flow cytometric method

EI Prest, F Hammes, S Kötzsch, MCM van Loosdrecht… - Water research, 2013 - Elsevier
Flow cytometry (FCM) is a rapid, cultivation-independent tool to assess and evaluate
bacteriological quality and biological stability of water. Here we demonstrate that a stringent …

Using flow cytometry for counting natural planktonic bacteria and understanding the structure of planktonic bacterial communities

JM Gasol, PA Del Giorgio - Scientia Marina, 2000 - scientiamarina.revistas.csic.es
Flow cytometry is rapidly becoming a routine methodology in aquatic microbial ecology. The
combination of simple to use bench-top flow cytometers and highly fluorescent nucleic acid …

Flow-cytometric total bacterial cell counts as a descriptive microbiological parameter for drinking water treatment processes

F Hammes, M Berney, Y Wang, M Vital, O Köster, T Egli - Water research, 2008 - Elsevier
There are significantly more microbial cells in drinking water than what can be cultured on
synthetic growth media. Nonetheless, cultivation-based heterotrophic plate counts (HPCs) …

Use of propidium monoazide for live/dead distinction in microbial ecology

A Nocker, P Sossa-Fernandez, MD Burr… - Applied and …, 2007 - Am Soc Microbiol
One of the prerequisites of making ecological conclusions derived from genetic fingerprints
is that bacterial community profiles reflect the live portion of the sample of interest. Propidium …

Molecular methods for the assessment of bacterial viability

JT Keer, L Birch - Journal of microbiological methods, 2003 - Elsevier
A significant number of pathogenic microorganisms can be found in environmental
reservoirs (air, water, soil). It is important to assess the viability status of these organisms to …

[HTML][HTML] Use of fluorescent probes to assess physiological functions of bacteriaat single-cell level

F Joux, P Lebaron - Microbes and infection, 2000 - Elsevier
A wide diversity of fluorescent probes is currently available to assess the physiological state
of microorganisms. The recent development of techniques such as solid-phase cytometry …