A census of human cancer genes
PA Futreal, L Coin, M Marshall, T Down… - Nature reviews …, 2004 - nature.com
A central aim of cancer research has been to identify the mutated genes that are causally
implicated in oncogenesis ('cancer genes'). After two decades of searching, how many have …
implicated in oncogenesis ('cancer genes'). After two decades of searching, how many have …
Mobile genetic elements: the agents of open source evolution
LS Frost, R Leplae, AO Summers… - Nature Reviews …, 2005 - nature.com
Horizontal genomics is a new field in prokaryotic biology that is focused on the analysis of
DNA sequences in prokaryotic chromosomes that seem to have originated from other …
DNA sequences in prokaryotic chromosomes that seem to have originated from other …
Discovery of seven novel Mammalian and avian coronaviruses in the genus deltacoronavirus supports bat coronaviruses as the gene source of alphacoronavirus and …
PCY Woo, SKP Lau, CSF Lam, CCY Lau… - Journal of …, 2012 - Am Soc Microbiol
Recently, we reported the discovery of three novel coronaviruses, bulbul coronavirus
HKU11, thrush coronavirus HKU12, and munia coronavirus HKU13, which were identified …
HKU11, thrush coronavirus HKU12, and munia coronavirus HKU13, which were identified …
OPM database and PPM web server: resources for positioning of proteins in membranes
MA Lomize, ID Pogozheva, H Joo… - Nucleic acids …, 2012 - academic.oup.com
Abstract The Orientations of Proteins in Membranes (OPM) database is a curated web
resource that provides spatial positions of membrane-bound peptides and proteins of known …
resource that provides spatial positions of membrane-bound peptides and proteins of known …
Assessing the utility of coevolution-based residue–residue contact predictions in a sequence-and structure-rich era
H Kamisetty, S Ovchinnikov… - Proceedings of the …, 2013 - National Acad Sciences
Recently developed methods have shown considerable promise in predicting residue–
residue contacts in protein 3D structures using evolutionary covariance information …
residue contacts in protein 3D structures using evolutionary covariance information …
[HTML][HTML] Improved ribosome-footprint and mRNA measurements provide insights into dynamics and regulation of yeast translation
Ribosome-footprint profiling provides genome-wide snapshots of translation, but technical
challenges can confound its analysis. Here, we use improved methods to obtain ribosome …
challenges can confound its analysis. Here, we use improved methods to obtain ribosome …
WebLogo: a sequence logo generator
WebLogo generates sequence logos, graphical representations of the patterns within a
multiple sequence alignment. Sequence logos provide a richer and more precise …
multiple sequence alignment. Sequence logos provide a richer and more precise …
UniProt: the universal protein knowledgebase
To provide the scientific community with a single, centralized, authoritative resource for
protein sequences and functional information, the Swiss‐Prot, TrEMBL and PIR protein …
protein sequences and functional information, the Swiss‐Prot, TrEMBL and PIR protein …
PANTHER: a library of protein families and subfamilies indexed by function
In the genomic era, one of the fundamental goals is to characterize the function of proteins
on a large scale. We describe a method, PANTHER, for relating protein sequence …
on a large scale. We describe a method, PANTHER, for relating protein sequence …
Genome sequence of the human malaria parasite Plasmodium falciparum
The parasite Plasmodium falciparum is responsible for hundreds of millions of cases of
malaria, and kills more than one million African children annually. Here we report an …
malaria, and kills more than one million African children annually. Here we report an …