The COSMIC Cancer Gene Census: describing genetic dysfunction across all human cancers
Z Sondka, S Bamford, CG Cole, SA Ward… - Nature Reviews …, 2018 - nature.com
Abstract The Catalogue of Somatic Mutations in Cancer (COSMIC) Cancer Gene Census
(CGC) is an expert-curated description of the genes driving human cancer that is used as a …
(CGC) is an expert-curated description of the genes driving human cancer that is used as a …
Variation interpretation predictors: principles, types, performance, and choice
Next‐generation sequencing methods have revolutionized the speed of generating variation
information. Sequence data have a plethora of applications and will increasingly be used for …
information. Sequence data have a plethora of applications and will increasingly be used for …
Identification of novel mutational drivers reveals oncogene dependencies in multiple myeloma
Understanding the profile of oncogene and tumor suppressor gene mutations with their
interactions and impact on the prognosis of multiple myeloma (MM) can improve the …
interactions and impact on the prognosis of multiple myeloma (MM) can improve the …
Passenger hotspot mutations in cancer
Current statistical models for assessing hotspot significance do not properly account for
variation in site-specific mutability, thereby yielding many false-positives. We thus (i) detail a …
variation in site-specific mutability, thereby yielding many false-positives. We thus (i) detail a …
DriverDBv2: a database for human cancer driver gene research
We previously presented DriverDB, a database that incorporates∼ 6000 cases of exome-
seq data, in addition to annotation databases and published bioinformatics algorithms …
seq data, in addition to annotation databases and published bioinformatics algorithms …
Comparison of algorithms for the detection of cancer drivers at subgene resolution
Understanding genetic events that lead to cancer initiation and progression remains one of
the biggest challenges in cancer biology. Traditionally, most algorithms for cancer-driver …
the biggest challenges in cancer biology. Traditionally, most algorithms for cancer-driver …
Analysis of genomic and transcriptomic variations as prognostic signature for lung adenocarcinoma
T Zengin, T Önal-Süzek - BMC bioinformatics, 2020 - Springer
Background Lung cancer is the leading cause of the largest number of deaths worldwide
and lung adenocarcinoma is the most common form of lung cancer. In order to understand …
and lung adenocarcinoma is the most common form of lung cancer. In order to understand …
[HTML][HTML] Characterization of potential driver mutations involved in human breast cancer by computational approaches
BK Rajendran, CX Deng - Oncotarget, 2017 - ncbi.nlm.nih.gov
Breast cancer is the second most frequently occurring form of cancer and is also the second
most lethal cancer in women worldwide. A genetic mutation is one of the key factors that …
most lethal cancer in women worldwide. A genetic mutation is one of the key factors that …
The somatic mutation landscape of premalignant colorectal adenoma
Objective There are few studies which characterised the molecular alterations in
premalignant colorectal adenomas. Our major goal was to establish colorectal adenoma …
premalignant colorectal adenomas. Our major goal was to establish colorectal adenoma …
Comprehensive profiling of genomic and transcriptomic differences between risk groups of lung adenocarcinoma and lung squamous cell carcinoma
T Zengin, T Önal-Süzek - Journal of personalized medicine, 2021 - mdpi.com
Lung cancer is the second most frequently diagnosed cancer type and responsible for the
highest number of cancer deaths worldwide. Lung adenocarcinoma (LUAD) and lung …
highest number of cancer deaths worldwide. Lung adenocarcinoma (LUAD) and lung …