Molecular spectroscopy of aqueous solutions: a theoretical perspective

T Giovannini, F Egidi, C Cappelli - Chemical Society Reviews, 2020 - pubs.rsc.org
Computational spectroscopy is an invaluable tool to both accurately reproduce the spectra
of molecular systems and provide a rationalization for the underlying physics. However, the …

Continuum vs. atomistic approaches to computational spectroscopy of solvated systems

T Giovannini, C Cappelli - Chemical Communications, 2023 - pubs.rsc.org
Molecular spectral signals can be significantly altered by solvent effects. Among the many
theoretical approaches to this problem, continuum and atomistic solvation models have …

Subsystem density‐functional theory (update)

CR Jacob, J Neugebauer - Wiley Interdisciplinary Reviews …, 2024 - Wiley Online Library
The past years since the publication of our review on subsystem density‐functional theory
(sDFT)(WIREs Comput Mol Sci. 2014, 4: 325–362) have witnessed a rapid development and …

Ultrafast spectroscopy of photoactive molecular systems from first principles: Where we stand today and where we are going

I Conti, G Cerullo, A Nenov… - Journal of the American …, 2020 - ACS Publications
Computational spectroscopy is becoming a mandatory tool for the interpretation of the
complex, and often congested, spectral maps delivered by modern non-linear multi-pulse …

[HTML][HTML] Dalton Project: A Python platform for molecular-and electronic-structure simulations of complex systems

JMH Olsen, S Reine, O Vahtras, E Kjellgren… - The Journal of …, 2020 - pubs.aip.org
The Dalton Project provides a uniform platform access to the underlying full-fledged
quantum chemistry codes Dalton and LSDalton as well as the PyFraME package for …

Absolutely localized projection-based embedding for excited states

X Wen, DS Graham, DV Chulhai… - Journal of Chemical …, 2019 - ACS Publications
We present a quantum embedding method that allows for calculation of local excited states
embedded in a Kohn–Sham density functional theory (DFT) environment. Projection-based …

Electrostatic embedding of machine learning potentials

K Zinovjev - Journal of Chemical Theory and Computation, 2023 - ACS Publications
This work presents a variant of an electrostatic embedding scheme that allows the
embedding of arbitrary machine learned potentials trained on molecular systems in vacuo …

Cost-effective simulations of vibrationally-resolved absorption spectra of fluorophores with machine-learning-based inhomogeneous broadening

EF Petrusevich, MHE Bousquet… - Journal of Chemical …, 2023 - ACS Publications
The results of electronic and vibrational structure simulations are an invaluable support for
interpreting experimental absorption/emission spectra, which stimulates the development of …

Avoiding electron spill-out in QM/MM calculations on excited states with simple pseudopotentials

A Marefat Khah, P Reinholdt, JMH Olsen… - Journal of Chemical …, 2020 - ACS Publications
QM/MM calculations of electronic excitations with diffuse basis sets often have large errors
due to spill-out of electrons from the quantum subsystem. The Pauli repulsion of the …

Frontiers in multiscale modeling of photoreceptor proteins

M Mroginski, S Adam, GS Amoyal… - Photochemistry and …, 2021 - Wiley Online Library
This perspective article highlights the challenges in the theoretical description of
photoreceptor proteins using multiscale modeling, as discussed at the CECAM workshop in …