The life and times of a tRNA

EM Phizicky, AK Hopper - RNA, 2023 - rnajournal.cshlp.org
The study of eukaryotic tRNA processing has given rise to an explosion of new information
and insights in the last several years. We now have unprecedented knowledge of each step …

An integrated, structure-and energy-based view of the genetic code

H Grosjean, E Westhof - Nucleic acids research, 2016 - academic.oup.com
The principles of mRNA decoding are conserved among all extant life forms. We present an
integrative view of all the interaction networks between mRNA, tRNA and rRNA: the intrinsic …

The chemical diversity of RNA modifications

RJ Ontiveros, J Stoute, KF Liu - Biochemical Journal, 2019 - portlandpress.com
Nucleic acid modifications in DNA and RNA ubiquitously exist among all the three kingdoms
of life. This trait significantly broadens the genome diversity and works as an important …

Chemical and conformational diversity of modified nucleosides affects tRNA structure and function

VYP Väre, ER Eruysal, A Narendran, KL Sarachan… - Biomolecules, 2017 - mdpi.com
RNAs are central to all gene expression through the control of protein synthesis. Four major
nucleosides, adenosine, guanosine, cytidine and uridine, compose RNAs and provide …

[HTML][HTML] Transfer RNA modification and infection–implications for pathogenicity and host responses

C San Koh, LP Sarin - Biochimica et Biophysica Acta (BBA)-Gene …, 2018 - Elsevier
Transfer RNA (tRNA) molecules are sumptuously decorated with evolutionary conserved
post-transcriptional nucleoside modifications that are essential for structural stability and …

Iron–sulfur proteins in plant mitochondria: roles and maturation

J Przybyla-Toscano, L Christ, O Keech… - Journal of …, 2021 - academic.oup.com
Abstract Iron–sulfur (Fe–S) clusters are prosthetic groups ensuring electron transfer
reactions, activating substrates for catalytic reactions, providing sulfur atoms for the …

Editing and methylation at a single site by functionally interdependent activities

MAT Rubio, KW Gaston, KM McKenney, IMC Fleming… - Nature, 2017 - nature.com
Nucleic acids undergo naturally occurring chemical modifications. Over 100 different
modifications have been described and every position in the purine and pyrimidine bases …

A census and categorization method of epitranscriptomic marks

J Mathlin, L Le Pera, T Colombo - International Journal of Molecular …, 2020 - mdpi.com
In the past few years, thorough investigation of chemical modifications operated in the cells
on ribonucleic acid (RNA) molecules is gaining momentum. This new field of research has …

[HTML][HTML] Transcript tinkering: RNA modifications in protozoan parasites

T Vignolini, JEC Couble, GRG Doré… - Current Opinion in …, 2024 - Elsevier
Highlights•Protozoan parasites encode a diverse and dynamic 'epitranscriptome'.•mRNA
modifications mediate unique mechanisms across a parasite's life cycle.•RNA modifications …

Retrograde nuclear transport from the cytoplasm is required for tRNATyr maturation in T. brucei

AC Kessler, SS Kulkarni, MJ Paulines, MAT Rubio… - RNA biology, 2018 - Taylor & Francis
Retrograde transport of tRNAs from the cytoplasm to the nucleus was first described in
Saccharomyces cerevisiae and most recently in mammalian systems. Although the function …