MPJ Express is a thread-safe Java messaging library that provides a full implementation of
the mpiJava 1.2 API specification. This specification defines a MPI-like bindings for the Java …

Since its introduction in 1993, the Message Passing Interface (MPI) has become a de facto
standard for writing High Performance Computing (HPC) applications on clusters and …

In the 1990s the Message Passing Interface Forum defined MPI bindings for Fortran, C, and
C++. With the success of MPI these relatively conservative languages have continued to …

Since its release, the Java programming language has attracted considerable attention from
the high‐performance computing (HPC) community because of its portability, high …

Gadget-2 is a massively parallel structure formation code for cosmological simulations. In
this paper, we present a Java version of Gadget-2. We evaluated the performance of the …

The Java language first came to public attention in 1995. Within a year, it was being
speculated that Java may be a good language for parallel and distributed computing. Its …

Technology trends suggest that the fastest networks will continue to provide link bandwidths
close to the memory and I/O subsystem limits. Because of these trends and the inevitable …

We address the problem of indexing data for the k nearest neighbors (k-nn) search. We
present a tree-based top-down indexing method that uses an iterative k-means algorithm for …

DNA sequence alignment is the most commonly application in computational biology. It is
essential pre-requisite of many other operations in computational biology applications …

Development of DNA sequence comparison technique is an active research activity in
computational biology application. Commonly techniques studied are dynamic programming …