Recent advances in molecular diagnostics of fungal plant pathogens: a mini review

G Hariharan, K Prasannath - Frontiers in Cellular and Infection …, 2021 - frontiersin.org
Phytopathogenic fungal species can cause enormous losses in quantity and quality of crop
yields and this is a major economic issue in the global agricultural sector. Precise and rapid …

Role of genomics in promoting the utilization of plant genetic resources in genebanks

PW Wambugu, MN Ndjiondjop… - Briefings in functional …, 2018 - academic.oup.com
Global efforts have seen the world's plant genetic resources (PGRs) conserved in about
1625 germ plasm repositories. Utility of these resources is important in increasing the …

Nanopore sequencing as a surveillance tool for plant pathogens in plant and insect tissues

A Bronzato Badial, D Sherman, A Stone… - Plant …, 2018 - Am Phytopath Society
Plant pathogens are constantly emerging and spreading into new areas and there are often
limited postdiagnosis treatment options for infection, making surveillance key to their control …

Biotechnological advancements in Phytophthora disease diagnosis, interaction and management in citrus

PN Gaikwad, V Sharma, J Singh, GS Sidhu, H Singh… - Scientia …, 2023 - Elsevier
Gummosis caused by Phytophthora spp. which affects citrus roots, trunk and fruits. This
review gives systematic and an updated overlook for addressing the isolation, different …

Potential use of microbial community genomes in various dimensions of agriculture productivity and its management: a review

MA Iquebal, J Jagannadham, S Jaiswal… - Frontiers in …, 2022 - frontiersin.org
Agricultural productivity is highly influenced by its associated microbial community. With
advancements in omics technology, metagenomics is known to play a vital role in microbial …

Promising perspectives for detection, identification, and quantification of plant pathogenic fungi and oomycetes through targeting mitochondrial DNA

T Kulik, K Bilska, M Żelechowski - International Journal of Molecular …, 2020 - mdpi.com
Fungi and oomycetes encompass many pathogens affecting crops worldwide. Their effective
control requires screening pathogens across the local and international trade networks …

A step towards validation of high-throughput sequencing for the identification of plant pathogenic oomycetes

AS Espindola, K Cardwell, FN Martin… - …, 2022 - Am Phytopath Society
The advancement in high-throughput sequencing (HTS) technology allows the detection of
pathogens without the need for isolation or template amplification. Plant regulatory agencies …

Ignored fungal community in activated sludge wastewater treatment plants: diversity and altitudinal characteristics

L Niu, Y Li, L Xu, P Wang, W Zhang, C Wang… - … Science and Pollution …, 2017 - Springer
Fungi are important contributors to the various functions of activated sludge wastewater
treatment plants (WWTPs); however, the diversity and geographic characteristics of fungal …

Exploring microbial diversity in the rhizosphere: a comprehensive review of metagenomic approaches and their applications

B Rajguru, M Shri, VD Bhatt - 3 Biotech, 2024 - Springer
The rhizosphere, the soil region influenced by plant roots, represents a dynamic
microenvironment where intricate interactions between plants and microorganisms shape …

TASPERT: Target-specific reverse transcript pools to improve HTS plant virus diagnostics

AS Espindola, D Sempertegui-Bayas, DF Bravo-Padilla… - Viruses, 2021 - mdpi.com
High-throughput sequencing (HTS) is becoming the new norm of diagnostics in plant
quarantine settings. HTS can be used to detect, in theory, all pathogens present in any given …