Deciphering functional groups of rumen microbiome and their underlying potentially causal relationships in shaping host traits
MY Xue, YY Xie, XW Zang, YF Zhong, XJ Ma, HZ Sun… - Imeta, 2024 - Wiley Online Library
Over the years, microbiome research has achieved tremendous advancements driven by
culture‐independent meta‐omics approaches. Despite extensive research, our …
culture‐independent meta‐omics approaches. Despite extensive research, our …
[HTML][HTML] The landscape and perspectives of the human gut metaproteomics
The human gut microbiome is closely associated with human health and diseases.
Metaproteomics has emerged as a valuable tool for studying the functionality of the gut …
Metaproteomics has emerged as a valuable tool for studying the functionality of the gut …
[HTML][HTML] MetaPep: A core peptide database for faster human gut metaproteomics database searches
Metaproteomics has increasingly been applied to study functional changes in the human gut
microbiome. Peptide identification is an important step in metaproteomics research, with …
microbiome. Peptide identification is an important step in metaproteomics research, with …
[HTML][HTML] The metaproteome of the gut microbiota in pediatric patients affected by COVID-19
V Marzano, SL Mortera, C Marangelo… - Frontiers in Cellular …, 2023 - frontiersin.org
Introduction The gut microbiota (GM) play a significant role in the infectivity and severity of
COVID-19 infection. However, the available literature primarily focuses on adult patients and …
COVID-19 infection. However, the available literature primarily focuses on adult patients and …
Multiomics to Characterize the Molecular Events Underlying Impaired Glucose Tolerance in FXR-Knockout Mice
The prevalence of different metabolic syndromes has grown globally, and the farnesoid X
receptor (FXR), a metabolic homeostat for glucose, lipid, and bile acid metabolisms, may …
receptor (FXR), a metabolic homeostat for glucose, lipid, and bile acid metabolisms, may …
LineageFilter: Improved Proteotyping of Complex Samples Using Metaproteomics and Machine Learning
H Hachemi, J Armengaud, L Grenga… - Journal of Proteome …, 2024 - ACS Publications
Metaproteomics is a powerful tool to characterize how microbiota function by analyzing their
proteic content by tandem mass spectrometry. Given the complexity of these samples …
proteic content by tandem mass spectrometry. Given the complexity of these samples …
Data science to biologists: Insights into microbiomics
Microbiome research has emerged as a diverse and prominent field, encompassing a wide
range of organisms and environments, from human beings to space habitats. The integration …
range of organisms and environments, from human beings to space habitats. The integration …
MOSCA 2.0: A bioinformatics framework for metagenomics, metatranscriptomics and metaproteomics data analysis and visualization
The analysis of meta‐omics data requires the utilization of several bioinformatics tools and
proficiency in informatics. The integration of multiple meta‐omics data is even more …
proficiency in informatics. The integration of multiple meta‐omics data is even more …
A complementary metaproteomic approach to interrogate microbiome cultivated from clinical colon biopsies
The human gut microbiome plays a vital role in preserving individual health and is intricately
involved in essential functions. Imbalances or dysbiosis within the microbiome can …
involved in essential functions. Imbalances or dysbiosis within the microbiome can …
Spectral entropy as a measure of the metaproteome complexity
The diversity and complexity of the microbiome's genomic landscape are not always
mirrored in its proteomic profile. Despite the anticipated proteomic diversity, observed …
mirrored in its proteomic profile. Despite the anticipated proteomic diversity, observed …