[HTML][HTML] Noncoding RNA therapeutics—challenges and potential solutions

M Winkle, SM El-Daly, M Fabbri, GA Calin - Nature reviews Drug …, 2021 - nature.com
Therapeutic targeting of noncoding RNAs (ncRNAs), such as microRNAs (miRNAs) and
long noncoding RNAs (lncRNAs), represents an attractive approach for the treatment of …

[HTML][HTML] A review of computational drug repositioning: strategies, approaches, opportunities, challenges, and directions

TN Jarada, JG Rokne, R Alhajj - Journal of cheminformatics, 2020 - Springer
Drug repositioning is the process of identifying novel therapeutic potentials for existing drugs
and discovering therapies for untreated diseases. Drug repositioning, therefore, plays an …

MicroRNAs and complex diseases: from experimental results to computational models

X Chen, D Xie, Q Zhao, ZH You - Briefings in bioinformatics, 2019 - academic.oup.com
Plenty of microRNAs (miRNAs) were discovered at a rapid pace in plants, green algae,
viruses and animals. As one of the most important components in the cell, miRNAs play a …

A survey of current trends in computational drug repositioning

J Li, S Zheng, B Chen, AJ Butte… - Briefings in …, 2016 - academic.oup.com
Computational drug repositioning or repurposing is a promising and efficient tool for
discovering new uses from existing drugs and holds the great potential for precision …

A review of connectivity map and computational approaches in pharmacogenomics

A Musa, LS Ghoraie, SD Zhang, G Glazko… - Briefings in …, 2018 - academic.oup.com
Large-scale perturbation databases, such as Connectivity Map (CMap) or Library of
Integrated Network-based Cellular Signatures (LINCS), provide enormous opportunities for …

MicroRNA-small molecule association identification: from experimental results to computational models

X Chen, NN Guan, YZ Sun, JQ Li… - Briefings in bioinformatics, 2020 - academic.oup.com
Small molecule is a kind of low molecular weight organic compound with variety of
biological functions. Studies have indicated that small molecules can inhibit a specific …

Integrative methods for analyzing big data in precision medicine

V Gligorijević, N Malod‐Dognin, N Pržulj - Proteomics, 2016 - Wiley Online Library
We provide an overview of recent developments in big data analyses in the context of
precision medicine and health informatics. With the advance in technologies capturing …

Predicting potential small molecule–miRNA associations based on bounded nuclear norm regularization

X Chen, C Zhou, CC Wang, Y Zhao - Briefings in Bioinformatics, 2021 - academic.oup.com
Mounting evidence has demonstrated the significance of taking microRNAs (miRNAs) as the
target of small molecule (SM) drugs for disease treatment. Given the fact that exploring new …

Ensemble of kernel ridge regression-based small molecule–miRNA association prediction in human disease

CC Wang, CC Zhu, X Chen - Briefings in Bioinformatics, 2022 - academic.oup.com
MicroRNAs (miRNAs) play crucial roles in human disease and can be targeted by small
molecule (SM) drugs according to numerous studies, which shows that identifying SM …

Small molecules targeting microRNA for cancer therapy: Promises and obstacles

D Wen, M Danquah, AK Chaudhary… - Journal of Controlled …, 2015 - Elsevier
Aberrant expression of miRNAs is critically implicated in cancer initiation and progression.
Therapeutic approaches focused on regulating miRNAs are therefore a promising approach …