The double round-robin population unravels the genetic architecture of grain size in barley

A Shrestha, F Cosenza, D van Inghelandt… - Journal of …, 2022 - academic.oup.com
Grain number, size and weight primarily determine the yield of barley. Although the genes
regulating grain number are well studied in barley, the genetic loci and the causal gene for …

Genetic mapping reveals new loci and alleles for flowering time and plant height using the double round-robin population of barley

F Cosenza, A Shrestha… - Journal of …, 2024 - academic.oup.com
Flowering time and plant height are two critical determinants of yield potential in barley
(Hordeum vulgare). Despite their role in plant physiological regulation, a complete overview …

The role of methylation and structural variants in shaping the recombination landscape of barley

FA Casale, C Arlt, M Kuehl, J Li, J Engelhorn, T Hartwig… - bioRxiv, 2024 - biorxiv.org
Meiotic recombination is not only a key mechanism for sexual adaptation in eukaryotes but
crucial for the accumulation of beneficial alleles in breeding populations. The effective …

Exploratory genomic sequence analysis reveals structural differences at key loci for growth habit, seed dormancy, and rust resistance in barley

C Massman, PJ Maughan, RS Nandety… - Genetic Resources and …, 2024 - Springer
Barley (Hordeum vulgare L.) is a major cereal grain with uses in the feed, food, and malting
industries. Growth habit, seed dormancy, and disease resistance are important …

[HTML][HTML] Benchmarking of structural variant detection in the tetraploid potato genome using linked-read sequencing

M Weisweiler, B Stich - Genomics, 2023 - Elsevier
It has recently been shown that structural variants (SV) can have a higher impact on gene
expression variation compared to single nucleotide variants (SNV) in different plant species …

Investigating the barley methylome, its variation and association with genomic, transcriptomic, and phenotypic variation

MA Kühl, PY Wu, A Shrestha, J Engelhorn, T Hartwig… - bioRxiv, 2024 - biorxiv.org
Epigenetic variation contributes to explaining the missing heritability of complex traits. In
order to understand the genome-wide methylation variation in spring barley, our objectives …

Unleashing Genomic Insights with AB Learning: A Self-Supervised Whole-Genome Language Model

B Naidenov - 2023 - search.proquest.com
The language of genetic code embodies a complex grammar and rich syntax of interacting
molecular elements. In this regard, the standard additive marker encoding scheme's inability …

Structural Genomic Variations and Their Effects on Phenotypes in Populus

I Porth, R Goessen, B Heinze - The Poplar Genome, 2024 - Springer
DNA copy numbers have recently emerged as an important new marker system. In the
absence of a contiguous reference genome, alternative detection systems such as the …

[图书][B] Chromoanagenesis in plants and the effects of structural variation in poplar

W Guo - 2023 - search.proquest.com
Structural variation plays an important role in plant genome architecture and phenotypes. It
is also suggested to be a new type of DNA marker for genomic selection in plant breeding …

INVESTIGATING THE GENETIC DIVERSITY OF THE BARLEY COMPOSITE CROSS PARENTS

Y Wen - 2024 - escholarship.org
Plants are remarkably able to colonize and succeed in a wide variety of environments. The
number and types of genetic changes that contribute to adaptation to different areas of …