[HTML][HTML] The role of chromatin during transcription

B Li, M Carey, JL Workman - Cell, 2007 - cell.com
Chromatin structure imposes significant obstacles on all aspects of transcription that are
mediated by RNA polymerase II. The dynamics of chromatin structure are tightly regulated …

Functions of site-specific histone acetylation and deacetylation

MD Shahbazian, M Grunstein - Annu. Rev. Biochem., 2007 - annualreviews.org
Histone acetylation regulates many cellular processes, and specific acetylation marks, either
singly or in combination, produce distinct outcomes. For example, the acetylation pattern on …

[HTML][HTML] Transcription shapes genome-wide histone acetylation patterns

BJE Martin, J Brind'Amour, A Kuzmin… - Nature …, 2021 - nature.com
Histone acetylation is a ubiquitous hallmark of transcription, but whether the link between
histone acetylation and transcription is causal or consequential has not been addressed …

Link communities reveal multiscale complexity in networks

YY Ahn, JP Bagrow, S Lehmann - nature, 2010 - nature.com
Networks have become a key approach to understanding systems of interacting objects,
unifying the study of diverse phenomena including biological organisms and human …

[HTML][HTML] Histone acetylation: a switch between repressive and permissive chromatin

A Eberharter, PB Becker - EMBO reports, 2002 - embopress.org
The organization of eukaryotic chromatin has a major impact on all nuclear processes
involving DNA substrates. Gene expression is affected by the positioning of individual …

Structure of the transcription coactivator SAGA

H Wang, C Dienemann, A Stützer, H Urlaub… - Nature, 2020 - nature.com
Gene transcription by RNA polymerase II is regulated by activator proteins that recruit the
coactivator complexes SAGA (Spt–Ada–Gcn5–acetyltransferase), and transcription factor IID …

Transcriptional Regulation in Saccharomyces cerevisiae: Transcription Factor Regulation and Function, Mechanisms of Initiation, and Roles of Activators and …

S Hahn, ET Young - Genetics, 2011 - academic.oup.com
Here we review recent advances in understanding the regulation of mRNA synthesis in
Saccharomyces cerevisiae. Many fundamental gene regulatory mechanisms have been …

[HTML][HTML] Cooperation between complexes that regulate chromatin structure and transcription

GJ Narlikar, HY Fan, RE Kingston - Cell, 2002 - cell.com
Chromatin structure creates barriers for each step in eukaryotic transcription. Here we
discuss how the activities of two major classes of chromatin-modifying complexes, ATP …

Histone modifications in transcriptional regulation

SL Berger - Current opinion in genetics & development, 2002 - Elsevier
Covalent modifications of the amino termini of the core histones in nucleosomes have
important roles in gene regulation. Research in the past two years reveals these …

[HTML][HTML] Bromodomain: an acetyl-lysine binding domain

L Zeng, MM Zhou - FEBS letters, 2002 - Elsevier
Bromodomains, an extensive family of evolutionarily conserved protein modules originally
found in proteins associated with chromatin and in nearly all nuclear histone …