Whole-genome regression and prediction methods applied to plant and animal breeding

G de Los Campos, JM Hickey, R Pong-Wong… - Genetics, 2013 - academic.oup.com
Genomic-enabled prediction is becoming increasingly important in animal and plant
breeding and is also receiving attention in human genetics. Deriving accurate predictions of …

[HTML][HTML] Genomic selection in aquaculture: application, limitations and opportunities with special reference to marine shrimp and pearl oysters

KR Zenger, MS Khatkar, DB Jones… - Frontiers in …, 2019 - frontiersin.org
Within aquaculture industries, selection based on genomic information (genomic selection)
has the profound potential to change genetic improvement programs and production …

Genome-wide association mapping including phenotypes from relatives without genotypes

H Wang, I Misztal, I Aguilar, A Legarra… - Genetics Research, 2012 - cambridge.org
A common problem for genome-wide association analysis (GWAS) is lack of power for
detection of quantitative trait loci (QTLs) and precision for fine mapping. Here, we present a …

Single Step, a general approach for genomic selection

A Legarra, OF Christensen, I Aguilar, I Misztal - Livestock Science, 2014 - Elsevier
Genomic evaluation methods assume that the reference population is genotyped and
phenotyped. This is most often false and the generation of pseudo-phenotypes is uncertain …

Genomic selection and its research progress in aquaculture breeding

H Song, T Dong, X Yan, W Wang, Z Tian… - Reviews in …, 2023 - Wiley Online Library
Since its introduction in 2001, genomic selection (GS) has progressed rapidly. As a research
and application hot topic, GS has led to a revolution in the field of animal and plant breeding …

[HTML][HTML] Prediction of complex human traits using the genomic best linear unbiased predictor

G de Los Campos, AI Vazquez, R Fernando… - PLoS …, 2013 - journals.plos.org
Despite important advances from Genome Wide Association Studies (GWAS), for most
complex human traits and diseases, a sizable proportion of genetic variance remains …

[HTML][HTML] A SUPER powerful method for genome wide association study

Q Wang, F Tian, Y Pan, ES Buckler, Z Zhang - PloS one, 2014 - journals.plos.org
Genome-Wide Association Studies shed light on the identification of genes underlying
human diseases and agriculturally important traits. This potential has been shadowed by …

[HTML][HTML] Invited review: Inbreeding in the genomics era: Inbreeding, inbreeding depression, and management of genomic variability

JT Howard, JE Pryce, C Baes, C Maltecca - Journal of dairy science, 2017 - Elsevier
Traditionally, pedigree-based relationship coefficients have been used to manage the
inbreeding and degree of inbreeding depression that exists within a population. The …

Accuracy of Genomic Selection Methods in a Standard Data Set of Loblolly Pine (Pinus taeda L.)

MFR Resende Jr, P Munoz, MDV Resende… - Genetics, 2012 - academic.oup.com
Genomic selection can increase genetic gain per generation through early selection.
Genomic selection is expected to be particularly valuable for traits that are costly to …

[HTML][HTML] Improving the accuracy of whole genome prediction for complex traits using the results of genome wide association studies

Z Zhang, U Ober, M Erbe, H Zhang, N Gao, J He, J Li… - PloS one, 2014 - journals.plos.org
Utilizing the whole genomic variation of complex traits to predict the yet-to-be observed
phenotypes or unobserved genetic values via whole genome prediction (WGP) and to infer …