Evolutionary genomics can improve prediction of species' responses to climate change

AM Waldvogel, B Feldmeyer, G Rolshausen… - Evolution …, 2020 - academic.oup.com
Global climate change (GCC) increasingly threatens biodiversity through the loss of species,
and the transformation of entire ecosystems. Many species are challenged by the pace of …

A fast, reproducible, high-throughput variant calling workflow for population genomics

CD Mirchandani, AJ Shultz… - Molecular Biology …, 2024 - academic.oup.com
The increasing availability of genomic resequencing data sets and high-quality reference
genomes across the tree of life present exciting opportunities for comparative population …

Genetic load has potential in large populations but is realized in small inbred populations

S Mathur, JA DeWoody - Evolutionary Applications, 2021 - Wiley Online Library
Populations with higher genetic diversity and larger effective sizes have greater evolutionary
capacity (ie, adaptive potential) to respond to ecological stressors. We are interested in how …

Whole-genome sequence analysis unveils different origins of European and Asiatic mouflon and domestication-related genes in sheep

ZH Chen, YX Xu, XL Xie, DF Wang… - Communications …, 2021 - nature.com
The domestication and subsequent development of sheep are crucial events in the history of
human civilization and the agricultural revolution. However, the impact of interspecific …

Multiple genomic solutions for local adaptation in two closely related species (sheep and goats) facing the same climatic constraints

B Benjelloun, K Leempoel, F Boyer, S Stucki… - Molecular …, 2024 - Wiley Online Library
The question of how local adaptation takes place remains a fundamental question in
evolutionary biology. The variation of allele frequencies in genes under selection over …

On the origin of European sheep as revealed by the diversity of the Balkan breeds and by optimizing population-genetic analysis tools

E Ciani, S Mastrangelo, A Da Silva, F Marroni… - Genetics Selection …, 2020 - Springer
Abstract Background In the Neolithic, domestic sheep migrated into Europe and
subsequently spread in westerly and northwesterly directions. Reconstruction of these …

Contrasting whole-genome and reduced representation sequencing for population demographic and adaptive inference: an alpine mammal case study

D Martchenko, ABA Shafer - Heredity, 2023 - nature.com
Genomes capture the adaptive and demographic history of a species, but the choice of
sequencing strategy and sample size can impact such inferences. We compared whole …

Conserved islands of divergence associated with adaptive variation in sockeye salmon are maintained by multiple mechanisms

PT Euclide, WA Larson, Y Shi, K Gruenthal… - Molecular …, 2023 - Wiley Online Library
Local adaptation is facilitated by loci clustered in relatively few regions of the genome,
termed genomic islands of divergence. The mechanisms that create and maintain these …

Distinct interspecific and intraspecific vulnerability of coastal species to global change

ES Nielsen, R Henriques, M Beger… - Global Change …, 2021 - Wiley Online Library
Characterising and predicting species responses to anthropogenic global change is one of
the key challenges in contemporary ecology and conservation. The sensitivity of marine …

Life on the edge: A new toolbox for population‐level climate change vulnerability assessments

CD Barratt, RE Onstein, ML Pinsky… - Methods in Ecology …, 2024 - Wiley Online Library
Global change is impacting biodiversity across all habitats on earth. New selection
pressures from changing climatic conditions and other anthropogenic activities are creating …