Prokaryotic photosynthesis and phototrophy illuminated
DA Bryant, NU Frigaard - Trends in microbiology, 2006 - cell.com
Genome sequencing projects are revealing new information about the distribution and
evolution of photosynthesis and phototrophy. Although coverage of the five phyla containing …
evolution of photosynthesis and phototrophy. Although coverage of the five phyla containing …
Metagenomics: DNA sequencing of environmental samples
Although genomics has classically focused on pure, easy-to-obtain samples, such as
microbes that grow readily in culture or large animals and plants, these organisms represent …
microbes that grow readily in culture or large animals and plants, these organisms represent …
The Sorcerer II Global Ocean Sampling Expedition: Northwest Atlantic through Eastern Tropical Pacific
The world's oceans contain a complex mixture of micro-organisms that are for the most part,
uncharacterized both genetically and biochemically. We report here a metagenomic study of …
uncharacterized both genetically and biochemically. We report here a metagenomic study of …
Comparative metagenomics of microbial communities
The species complexity of microbial communities and challenges in culturing representative
isolates make it difficult to obtain assembled genomes. Here we characterize and compare …
isolates make it difficult to obtain assembled genomes. Here we characterize and compare …
Genomic insights to SAR86, an abundant and uncultivated marine bacterial lineage
Bacteria in the 16S rRNA clade SAR86 are among the most abundant uncultivated
constituents of microbial assemblages in the surface ocean for which little genomic …
constituents of microbial assemblages in the surface ocean for which little genomic …
Bioinformatics for whole-genome shotgun sequencing of microbial communities
K Chen, L Pachter - PLoS computational biology, 2005 - journals.plos.org
The application of whole-genome shotgun sequencing to microbial communities represents
a major development in metagenomics, the study of uncultured microbes via the tools of …
a major development in metagenomics, the study of uncultured microbes via the tools of …
Marine bacterial and archaeal ion-pumping rhodopsins: genetic diversity, physiology, and ecology
The recognition of a new family of rhodopsins in marine planktonic bacteria, proton-pumping
proteorhodopsin, expanded the known phylogenetic range, environmental distribution, and …
proteorhodopsin, expanded the known phylogenetic range, environmental distribution, and …
Light stimulates growth of proteorhodopsin-containing marine Flavobacteria
L Gómez-Consarnau, JM González, M Coll-Lladó… - Nature, 2007 - nature.com
Proteorhodopsins are bacterial light-dependent proton pumps. Their discovery within
genomic material from uncultivated marine bacterioplankton caused considerable …
genomic material from uncultivated marine bacterioplankton caused considerable …
Decoupling of respiration rates and abundance in marine prokaryoplankton
The ocean–atmosphere exchange of CO2 largely depends on the balance between marine
microbial photosynthesis and respiration. Despite vast taxonomic and metabolic diversity …
microbial photosynthesis and respiration. Despite vast taxonomic and metabolic diversity …
Proteorhodopsin lateral gene transfer between marine planktonic Bacteria and Archaea
Abstract Planktonic Bacteria, Archaea and Eukarya reside and compete in the ocean's
photic zone under the pervasive influence of light. Bacteria in this environment were recently …
photic zone under the pervasive influence of light. Bacteria in this environment were recently …