Use of metatranscriptomics in microbiome research
S Bashiardes… - … and biology insights, 2016 - journals.sagepub.com
The human intestinal microbiome is a microbial ecosystem that expresses as many as 100
times more genes than the human host, thereby constituting an important component of the …
times more genes than the human host, thereby constituting an important component of the …
Plant-growth-promoting rhizobacteria to improve crop growth in saline soils: a review
Saline soils are a major issue for agriculture because salt turns agronomically useful lands
into unproductive areas. The United Nations Environment Program estimates that …
into unproductive areas. The United Nations Environment Program estimates that …
Bacterial small RNA regulators: versatile roles and rapidly evolving variations
S Gottesman, G Storz - Cold Spring Harbor perspectives …, 2011 - cshperspectives.cshlp.org
Small RNA regulators (sRNAs) have been identified in a wide range of bacteria and found to
play critical regulatory roles in many processes. The major families of sRNAs include true …
play critical regulatory roles in many processes. The major families of sRNAs include true …
The PGPR mechanisms of salt stress adaptation and plant growth promotion
R Shultana, ATK Zuan, UA Naher, AKMM Islam… - Agronomy, 2022 - mdpi.com
Worldwide crop productivity hampers severely due to the adverse effects of salinity. Global
warming causes a rapid escalation of the salt-affected area, and new agricultural land is …
warming causes a rapid escalation of the salt-affected area, and new agricultural land is …
Molecular biology of cyanobacterial salt acclimation
M Hagemann - FEMS microbiology reviews, 2011 - academic.oup.com
High and changing salt concentrations represent major abiotic factors limiting the growth of
microorganisms. During their long evolution, cyanobacteria have adapted to aquatic habitats …
microorganisms. During their long evolution, cyanobacteria have adapted to aquatic habitats …
cis-Antisense RNA, Another Level of Gene Regulation in Bacteria
SUMMARY A substantial amount of antisense transcription is a hallmark of gene expression
in eukaryotes. However, antisense transcription was first demonstrated in bacteria almost 50 …
in eukaryotes. However, antisense transcription was first demonstrated in bacteria almost 50 …
Prokaryotic transcriptomics: a new view on regulation, physiology and pathogenicity
R Sorek, P Cossart - Nature Reviews Genetics, 2010 - nature.com
Transcriptome-wide studies in eukaryotes have been instrumental in the characterization of
fundamental regulatory mechanisms for more than a decade. By contrast, in prokaryotes …
fundamental regulatory mechanisms for more than a decade. By contrast, in prokaryotes …
An experimentally anchored map of transcriptional start sites in the model cyanobacterium Synechocystis sp. PCC6803
J Mitschke, J Georg, I Scholz… - Proceedings of the …, 2011 - National Acad Sciences
There has been an increasing interest in cyanobacteria because these photosynthetic
organisms convert solar energy into biomass and because of their potential for the …
organisms convert solar energy into biomass and because of their potential for the …
Comparative genomics reveals 104 candidate structured RNAs from bacteria, archaea, and their metagenomes
Z Weinberg, JX Wang, J Bogue, J Yang, K Corbino… - Genome biology, 2010 - Springer
Abstract Background Structured noncoding RNAs perform many functions that are essential
for protein synthesis, RNA processing, and gene regulation. Structured RNAs can be …
for protein synthesis, RNA processing, and gene regulation. Structured RNAs can be …
Comparative Analysis of the Primary Transcriptome of Synechocystis sp. PCC 6803
RNA-seq and especially differential RNA-seq-type transcriptomic analyses (dRNA-seq) are
powerful analytical tools, as they not only provide insights into gene expression changes but …
powerful analytical tools, as they not only provide insights into gene expression changes but …