Statistical analysis in metabolic phenotyping

BJ Blaise, GDS Correia, GA Haggart, I Surowiec… - Nature …, 2021 - nature.com
Metabolic phenotyping is an important tool in translational biomedical research. The
advanced analytical technologies commonly used for phenotyping, including mass …

Fecal microbiota transplantation plus anti-PD-1 immunotherapy in advanced melanoma: a phase I trial

B Routy, JG Lenehan, WH Miller Jr, R Jamal… - Nature medicine, 2023 - nature.com
Fecal microbiota transplantation (FMT) represents a potential strategy to overcome
resistance to immune checkpoint inhibitors in patients with refractory melanoma; however …

Metabolome-wide association study on ABCA7 indicates a role of ceramide metabolism in Alzheimer's disease

A Dehghan, RC Pinto, I Karaman… - Proceedings of the …, 2022 - National Acad Sciences
Genome-wide association studies (GWASs) have identified genetic loci associated with the
risk of Alzheimer's disease (AD), but the molecular mechanisms by which they confer risk …

The gut microbiota and metabolome are associated with diminished COVID-19 vaccine-induced antibody responses in immunosuppressed inflammatory bowel …

JL Alexander, BH Mullish, NP Danckert, Z Liu… - …, 2023 - thelancet.com
Background Patients with inflammatory bowel disease (IBD) treated with anti-TNF therapy
exhibit attenuated humoral immune responses to vaccination against SARS-CoV-2. The gut …

[HTML][HTML] Inulin-type fructans and 2'fucosyllactose alter both microbial composition and appear to alleviate stress-induced mood state in a working population compared …

PPJ Jackson, A Wijeyesekera, CM Williams… - The American journal of …, 2023 - Elsevier
Background There is increasing interest in the bidirectional relationship existing between
the gut and brain and the effects of both oligofructose and 2'fucosyllactose to alter microbial …

Pathobionts in the tumour microbiota predict survival following resection for colorectal cancer

JL Alexander, JM Posma, A Scott, L Poynter, SE Mason… - Microbiome, 2023 - Springer
Background and aims The gut microbiota is implicated in the pathogenesis of colorectal
cancer (CRC). We aimed to map the CRC mucosal microbiota and metabolome and define …

Urinary metabolic phenotyping for Alzheimer's disease

N Kurbatova, M Garg, L Whiley, E Chekmeneva… - Scientific reports, 2020 - nature.com
Finding early disease markers using non-invasive and widely available methods is essential
to develop a successful therapy for Alzheimer's Disease. Few studies to date have examined …

Direct on-swab metabolic profiling of vaginal microbiome host interactions during pregnancy and preterm birth

P Pruski, GDS Correia, HV Lewis, K Capuccini… - Nature …, 2021 - nature.com
The pregnancy vaginal microbiome contributes to risk of preterm birth, the primary cause of
death in children under 5 years of age. Here we describe direct on-swab metabolic profiling …

Representing the metabolome with high fidelity: range and response as quality control factors in LC-MS-based global profiling

CJ Sands, M Gómez-Romero, G Correia… - Analytical …, 2021 - ACS Publications
Liquid chromatography–mass spectrometry (LC-MS) is a powerful and widely used
technique for measuring the abundance of chemical species in living systems. Its sensitivity …

Machine Learning at the Interface of Polymer Science and Biology: How Far Can We Go?

E Gianti, S Percec - Biomacromolecules, 2022 - ACS Publications
This Perspective outlines recent progress and future directions for using machine learning
(ML), a data-driven method, to address critical questions in the design, synthesis …