Neuronal tracing for connectomic studies

J Lu - Neuroinformatics, 2011 - Springer
Reconstruction of the complete wiring diagram, or connectome, of a neural circuit provides
an alternative approach to conventional circuit analysis. One major obstacle of …

[HTML][HTML] Rapid reconstruction of 3D neuronal morphology from light microscopy images with augmented rayburst sampling

X Ming, A Li, J Wu, C Yan, W Ding, H Gong, S Zeng… - PloS one, 2013 - journals.plos.org
Digital reconstruction of three-dimensional (3D) neuronal morphology from light microscopy
images provides a powerful technique for analysis of neural circuits. It is time-consuming to …

3D actin network centerline extraction with multiple active contours

T Xu, D Vavylonis, X Huang - Medical image analysis, 2014 - Elsevier
Fluorescence microscopy is frequently used to study two and three dimensional network
structures formed by cytoskeletal polymer fibers such as actin filaments and actin cables …

Automatic spinal cord segmentation from axial-view MRI slices using CNN with grayscale regularized active contour propagation

X Zhang, Y Li, Y Liu, SX Tang, X Liu… - Computers in Biology …, 2021 - Elsevier
Accurate positioning of the responsible segment for patients with cervical spondylotic
myelopathy (CSM) is clinically important not only to the surgery but also to reduce the …

[HTML][HTML] NetMets: software for quantifying and visualizing errors in biological network segmentation

D Mayerich, C Bjornsson, J Taylor, B Roysam - BMC bioinformatics, 2012 - Springer
One of the major goals in biomedical image processing is accurate segmentation of
networks embedded in volumetric data sets. Biological networks are composed of a …

Robust tracing and visualization of heterogeneous microvascular networks

PA Govyadinov, T Womack, JL Eriksen… - IEEE transactions on …, 2018 - ieeexplore.ieee.org
Advances in high-throughput imaging allow researchers to collect three-dimensional images
of whole organ microvascular networks. These extremely large images contain networks that …

Actin filament tracking in electron tomograms of negatively stained lamellipodia using the localized radon transform

C Winkler, M Vinzenz, JV Small, C Schmeiser - Journal of structural biology, 2012 - Elsevier
The aim of this work was to develop a protocol for automated tracking of actin filaments in
electron tomograms of lamellipodia embedded in negative stain. We show that a localized …

Flemish accent identification based on formant and duration features

PJ Ghesquiere… - 2002 IEEE International …, 2002 - ieeexplore.ieee.org
In this paper, we describe a method to identify Flemish accents and examine the contribution
of different features. Although Flanders is quite small, we found that, even when speakers …

Knife-edge scanning microscopy for bright-field multi-cubic centimeter analysis of microvasculature

MJ Pesavento, C Miller, K Pelton, M Maloof… - Microscopy …, 2017 - academic.oup.com
Serial section microscopy has proven to be a powerful tool in examining the 3-dimensional
(3D) nature of tissue; however, it is limited by the size of tissue samples that can be used …

[图书][B] Cellular Imaging

E Hanssen, E Hanssen, Ascheron - 2018 - Springer
Like most microscopists, I didn't fall in the mould as an undergraduate student. At the time I
was certain I was destined to be a molecular biologist, never visualizing the actual samples I …