Mechanisms and uses of hydrogen exchange

SW Englander, TR Sosnick, JJ Englander… - Current opinion in …, 1996 - Elsevier
Recent work has largely completed our understanding of the hydrogen-exchange chemistry
of unstructured proteins and nucleic acids. Some of the high-energy structural fluctuations …

Hydrogen exchange: the modern legacy of Linderstrøm‐Lang

SW Englander, L Mayne, Y Bai, TR Sosnick - Protein science, 1997 - Wiley Online Library
This discussion, prepared for the Protein Society's symposium honoring the 100th
anniversary of Kaj Linderstrøm‐Lang, shows how hydrogen exchange approaches initially …

Protein folding intermediates and pathways studied by hydrogen exchange

SW Englander - Annual review of biophysics and biomolecular …, 2000 - annualreviews.org
▪ Abstract In order to solve the immensely difficult protein-folding problem, it will be
necessary to characterize the barriers that slow folding and the intermediate structures that …

Probing the non‐covalent structure of proteins by amide hydrogen exchange and mass spectrometry

DL Smith, Y Deng, Z Zhang - Journal of mass spectrometry, 1997 - Wiley Online Library
The rates at which hydrogens located at peptide amide linkages in proteins undergo isotopic
exchange when a protein is exposed to D2O depend on whether these amide hydrogens …

Protein stability parameters measured by hydrogen exchange

Y Bai, JS Milne, L Mayne… - … : Structure, Function, and …, 1994 - Wiley Online Library
The hydrogen exchange (HX) rates of the slowest peptide group NH hydrogens in oxidized
cytochrome c (equine) are controlled by the transient global unfolding equilibrium. These …

Structure-based calculation of the equilibrium folding pathway of proteins. Correlation with hydrogen exchange protection factors

VJ Hilser, E Freire - Journal of molecular biology, 1996 - Elsevier
A new statistical thermodynamic formalism has been developed in order to describe the
equilibrium folding pathway of proteins. The resulting formalism allows calculation of the …

Detection of rare partially folded molecules in equilibrium with the native conformation of RNaseH

AK Chamberlain, TM Handel, S Marqusee - Nature structural biology, 1996 - nature.com
Despite the general observation that single domain proteins denature in a completely
cooperative manner, amide hydrogen exchange of ribonuclease H in low levels of …

Residue depth: a novel parameter for the analysis of protein structure and stability

S Chakravarty, R Varadarajan - Structure, 1999 - cell.com
Background: Accessible surface area is a parameter that is widely used in analyses of
protein structure and stability. Accessible surface area does not, however, distinguish …

Protein folding and misfolding: mechanism and principles

SW Englander, L Mayne, MMG Krishna - Quarterly reviews of …, 2007 - cambridge.org
Two fundamentally different views of how proteins fold are now being debated. Do proteins
fold through multiple unpredictable routes directed only by the energetically downhill nature …

[PDF][PDF] A thermostable 35-residue subdomain within villin headpiece

JC McKnight, DS Doering… - … of molecular biology, 1996 - pdfs.semanticscholar.org
MA 02142, USA structure. In particular, the slowly exchanging amide protons in HP-35 have
protection factors that are slightly larger than those predicted if exchange occurred only from …