Function of sperm chromatin structural elements in fertilization and development

WS Ward - MHR: Basic science of reproductive medicine, 2009 - academic.oup.com
Understanding how DNA is packaged in the mammalian sperm cell has important
implications for human infertility as well as for the cell biology. Recent advances in the study …

The controversy, potential and roles of spermatozoal RNA

D Miller, GC Ostermeier, SA Krawetz - Trends in molecular medicine, 2005 - cell.com
The majority of cellular and molecular andrologists endorse the view that the sperm is a
vessel for transporting the paternal genome to the waiting egg and nothing more. Any …

[HTML][HTML] The 3D structure of the immunoglobulin heavy-chain locus: implications for long-range genomic interactions

S Jhunjhunwala, MC van Zelm, MM Peak, S Cutchin… - Cell, 2008 - cell.com
The immunoglobulin heavy-chain (Igh) locus is organized into distinct regions that contain
multiple variable (VH), diversity (DH), joining (JH) and constant (CH) coding elements. How …

Chromatin loops are selectively anchored using scaffold/matrix-attachment regions

HHQ Heng, S Goetze, CJ Ye, G Liu… - Journal of cell …, 2004 - journals.biologists.com
The biological significance of nuclear scaffold/matrix-attachment regions (S/MARs) remains
a topic of long-standing interest. The key to understanding S/MAR behavior relies on …

Visualization of looping involving the immunoglobulin heavy-chain locus in developing B cells

C Sayegh, S Jhunjhunwala, R Riblet… - Genes & …, 2005 - genesdev.cshlp.org
The immunoglobulin heavy-chain (IgH) locus undergoes large-scale contraction in B cells
poised to undergo IgH V (D) J recombination. We considered the possibility that looping of …

On a chromosome far, far away: LCRs and gene expression

A Dean - TRENDS in Genetics, 2006 - cell.com
Transcription activation of a gene involves the ordered recruitment of components of the
basal transcription machinery in concert with alterations in chromatin structure, including …

Quantification of epigenetic DNA modifications in the subchromatin structure matrix attachment regions by stable isotope dilution UHPLC-MS/MS analysis

R Zhang, W Lai, H Wang - Analytical Chemistry, 2021 - ACS Publications
To date, subchromatin structure-based quantification of epigenetic DNA modifications is
limited. Matrix attachment regions (MARs), an important subchromatin structure, contain …

SATB1 family protein expressed during early erythroid differentiation modifies globin gene expression

J Wen, S Huang, H Rogers, LA Dickinson… - Blood, 2005 - ashpublications.org
Special AT-rich binding protein 1 (SATB1) nuclear protein, expressed predominantly in T
cells, regulates genes through targeting chromatin remodeling during T-cell maturation …

[HTML][HTML] Nuclear matrix interactions at the human protamine domain: a working model of potentiation

RP Martins, GC Ostermeier, SA Krawetz - Journal of Biological Chemistry, 2004 - ASBMB
The compact eukaryotic genome must be selectively opened to grant trans-factor access to
cis-regulatory elements to overcome the primary barrier to gene transcription. The …

[HTML][HTML] Genomic mapping of RNA polymerase II reveals sites of co-transcriptional regulation in human cells

AS Brodsky, CA Meyer, IA Swinburne, G Hall… - Genome biology, 2005 - Springer
Background Transcription by RNA polymerase II is regulated at many steps including
initiation, promoter release, elongation and termination. Accumulation of RNA polymerase II …