Mycobiome diversity: high-throughput sequencing and identification of fungi

RH Nilsson, S Anslan, M Bahram… - Nature Reviews …, 2019 - nature.com
Fungi are major ecological players in both terrestrial and aquatic environments by cycling
organic matter and channelling nutrients across trophic levels. High-throughput sequencing …

[HTML][HTML] Soil quality–A critical review

EK Bünemann, G Bongiorno, Z Bai, RE Creamer… - Soil biology and …, 2018 - Elsevier
Sampling and analysis or visual examination of soil to assess its status and use potential is
widely practiced from plot to national scales. However, the choice of relevant soil attributes …

Current and emerging trends in techniques for plant pathogen detection

M Venbrux, S Crauwels, H Rediers - Frontiers in Plant Science, 2023 - frontiersin.org
Plant pathogenic microorganisms cause substantial yield losses in several economically
important crops, resulting in economic and social adversity. The spread of such plant …

Microbial biopesticides in agroecosystems

L Ruiu - Agronomy, 2018 - mdpi.com
Microbial biopesticides include several microorganisms like bacteria, fungi, baculoviruses,
and nematode-associated bacteria acting against invertebrate pests in agro-ecosystems …

Global analysis of the apple fruit microbiome: are all apples the same?

A Abdelfattah, S Freilich, R Bartuv… - Environmental …, 2021 - Wiley Online Library
We present the first worldwide study on the apple (Malus× domestica) fruit microbiome that
examines questions regarding the composition and the assembly of microbial communities …

The fruit microbiome: A new frontier for postharvest biocontrol and postharvest biology

S Droby, M Wisniewski - Postharvest Biology and Technology, 2018 - Elsevier
Microorganisms are an integral part of the composition of fruits and vegetables and are
found as epiphytes on the surface or as endophytes within tissues. The realization that fruit …

Metagenomics approaches for the detection and surveillance of emerging and recurrent plant pathogens

E Piombo, A Abdelfattah, S Droby, M Wisniewski… - Microorganisms, 2021 - mdpi.com
Globalization has a dramatic effect on the trade and movement of seeds, fruits and
vegetables, with a corresponding increase in economic losses caused by the introduction of …

Unravelling the fruit microbiome: The key for developing effective biological control strategies for postharvest diseases

H Zhang, NA Serwah Boateng… - … reviews in food …, 2021 - Wiley Online Library
Fruit‐based diets are recognized for their benefits to human health. The safety of fruit is a
global concern for scientists. Fruit microbiome represents the whole microorganisms that are …

High‐throughput identification and diagnostics of pathogens and pests: overview and practical recommendations

L Tedersoo, R Drenkhan, S Anslan… - Molecular ecology …, 2019 - Wiley Online Library
High‐throughput identification technologies provide efficient tools for understanding the
ecology and functioning of microorganisms. Yet, these methods have been only rarely used …

Compositional shifts in the strawberry fruit microbiome in response to near-harvest application of Metschnikowia fructicola, a yeast biocontrol agent

VY Zhimo, A Kumar, A Biasi, S Salim… - Postharvest Biology and …, 2021 - Elsevier
Plant-associated microbial communities form complex co-associations that play a role in
promoting plant productivity and health, although the underlying mechanisms have not been …