The key players of parthanatos: opportunities for targeting multiple levels in the therapy of parthanatos-based pathogenesis

L Liu, J Li, Y Ke, X Zeng, J Gao, X Ba… - Cellular and Molecular Life …, 2022 - Springer
Parthanatos is a form of regulated cell death involved in the pathogenesis of many diseases,
particularly neurodegenerative disorders, such as Parkinson's disease, Alzheimer's disease …

Type II restriction endonucleases—a historical perspective and more

A Pingoud, GG Wilson, W Wende - Nucleic acids research, 2014 - academic.oup.com
This article continues the series of Surveys and Summaries on restriction endonucleases
(REases) begun this year in Nucleic Acids Research. Here we discuss 'Type II'REases, the …

A nuclease that mediates cell death induced by DNA damage and poly (ADP-ribose) polymerase-1

Y Wang, R An, GK Umanah, H Park, K Nambiar… - Science, 2016 - science.org
INTRODUCTION Poly (ADP-ribose)(PAR) polymerase-1 (PARP-1) is a nuclear enzyme
responding to oxidative stress and DNA damage. Excessive activation of PARP-1 causes an …

The Card1 nuclease provides defence during type III CRISPR immunity

JT Rostøl, W Xie, V Kuryavyi, P Maguin, K Kao… - Nature, 2021 - nature.com
In the type III CRISPR–Cas immune response of prokaryotes, infection triggers the
production of cyclic oligoadenylates that bind and activate proteins that contain a CARF …

Global functional atlas of Escherichia coli encompassing previously uncharacterized proteins

P Hu, SC Janga, M Babu, JJ Díaz-Mejía, G Butland… - PLoS …, 2009 - journals.plos.org
One-third of the 4,225 protein-coding genes of Escherichia coli K-12 remain functionally
unannotated (orphans). Many map to distant clades such as Archaea, suggesting …

Evolutionary Genetics of Cytoplasmic Incompatibility Genes cifA and cifB in Prophage WO of Wolbachia

ARI Lindsey, DW Rice, SR Bordenstein… - Genome biology and …, 2018 - academic.oup.com
The bacterial endosymbiont Wolbachia manipulates arthropod reproduction to facilitate its
maternal spread through host populations. The most common manipulation is cytoplasmic …

[HTML][HTML] Identification of KIAA1018/FAN1, a DNA repair nuclease recruited to DNA damage by monoubiquitinated FANCD2

C MacKay, AC Déclais, C Lundin, A Agostinho… - Cell, 2010 - cell.com
DNA interstrand crosslinks (ICLs) are highly toxic because they block the progression of
replisomes. The Fanconi Anemia (FA) proteins, encoded by genes that are mutated in FA …

[HTML][HTML] Deficiency of FANCD2-associated nuclease KIAA1018/FAN1 sensitizes cells to interstrand crosslinking agents

K Kratz, B Schöpf, S Kaden, A Sendoel, R Eberhard… - Cell, 2010 - cell.com
Cytotoxicity of cisplatin and mitomycin C (MMC) is ascribed largely to their ability to generate
interstrand crosslinks (ICLs) in DNA, which block the progression of replication forks. The …

Sequence, structure and functional diversity of PD-(D/E) XK phosphodiesterase superfamily

K Steczkiewicz, A Muszewska, L Knizewski… - Nucleic acids …, 2012 - academic.oup.com
Proteins belonging to PD-(D/E) XK phosphodiesterases constitute a functionally diverse
superfamily with representatives involved in replication, restriction, DNA repair and tRNA …

High-resolution temporal profiling of E. coli transcriptional response

A Miano, K Rychel, A Lezia, A Sastry, B Palsson… - Nature …, 2023 - nature.com
Understanding how cells dynamically adapt to their environment is a primary focus of
biology research. Temporal information about cellular behavior is often limited by both small …