Recombinant Production and Characterization of a Highly Active Alkaline Phosphatase from Marine Bacterium Cobetia marina

V Golotin, L Balabanova, G Likhatskaya… - Marine …, 2015 - Springer
The psychrophilic marine bacterium, Cobetia marina, recovered from the mantle tissue of the
marine mussel, Crenomytilus grayanus, which contained a gene encoding alkaline …

A minimum set of stable blocks for rational design of polypeptide chains

AN Nekrasov, LG Alekseeva, RА Pogosyan… - Biochimie, 2019 - Elsevier
The aim of this work was to find a minimal set of structurally stable pentapeptides, which
allows forming a polypeptide chain of a required 3D structure. To search for factors that …

AutoRNA: RNA tertiary structure prediction using variational autoencoder

MA Kazanskii, L Uroshlev, F Zatylkin, I Pospelova… - bioRxiv, 2024 - biorxiv.org
Understanding the RNA tertiary structure is crucial for advancing therapeutic development
and vaccine design. Previous methods, such as dynamic simulations, have been used to …

Predetermined Conformations in Bends of Polypeptide Chains: A Geometric Analysis

LA Uroshlev, IY Torshin, AV Batyanovskii, NG Esipova… - Biophysics, 2019 - Springer
Abstract β-Bends are typical local structures of the polypeptide chain, are widespread in
proteins, and play an important structural and functional role. It is possible to expect a priori …

Role of structural water for prediction of cation binding sites in apoproteins

LA Uroshlev, IV Kulakovskiy, NG Esipova… - Journal of …, 2018 - Taylor & Francis
Structures of many metal-binding proteins are often obtained without structural cations in
their apoprotein forms. Missing cation coordinates are usually updated from structural …

[PDF][PDF] Предопределенные конформации в изгибах полипептидных цепей. Геометрический анализ

ЛА Урошлев, ИЮ Торшин, АВ Батяновский… - Биофизика, 2019 - csl.isc.irk.ru
Поcтупила в pедакцию 07.05. 18 г. Поcле доpаботки 29.01. 19 г. Пpинята к печати 04.02.
19 г. β-Изгибы–типовые локальные cтpуктуpы полипептидной цепи, шиpоко …

GPGPU-COMPUTING FOR PREDICTION OF SMALL LIGAND BINDING SITES IN PROTEINS

LA Uroshlev, IV Kulakovskiy, SV Rakhmanov… - THE SEVENTH, 2010 - conf.icgbio.ru
Results: We present a software PIONCA (Protein-ION CAlculator) which uses effective
GPGPU implementation of the empirical potential-based method for small ligand binding …

[引用][C] Prediction of cation binding sites using structural water

[引用][C] DETERMINATION OF SORT AND POSITION OF IONS IN RNA-IONS INTERACTION

L eonid Uroshlev, V Makeev, J Bernauer