Advances in RNA 3D structure modeling using experimental data
RNA is a unique bio-macromolecule that can both record genetic information and perform
biological functions in a variety of molecular processes, including transcription, splicing …
biological functions in a variety of molecular processes, including transcription, splicing …
Strategies for RNA folding and assembly
R Schroeder, A Barta, K Semrad - Nature reviews Molecular cell biology, 2004 - nature.com
RNA is structurally very flexible, which provides the basis for its functional diversity. An RNA
molecule can often adopt different conformations, which enables the regulation of its …
molecule can often adopt different conformations, which enables the regulation of its …
On the importance of cotranscriptional RNA structure formation
D Lai, JR Proctor, IM Meyer - Rna, 2013 - rnajournal.cshlp.org
The expression of genes, both coding and noncoding, can be significantly influenced by
RNA structural features of their corresponding transcripts. There is by now mounting …
RNA structural features of their corresponding transcripts. There is by now mounting …
Progress and challenges for chemical probing of RNA structure inside living cells
M Kubota, C Tran, RC Spitale - Nature chemical biology, 2015 - nature.com
Proper gene expression is essential for the survival of every cell. Once thought to be a
passive transporter of genetic information, RNA has recently emerged as a key player in …
passive transporter of genetic information, RNA has recently emerged as a key player in …
Atomic level architecture of group I introns revealed
Twenty-two years after their discovery as ribozymes, the self-splicing group I introns are
finally disclosing their architecture at the atomic level. The crystal structures of three group I …
finally disclosing their architecture at the atomic level. The crystal structures of three group I …
Dissecting RNA chaperone activity
L Rajkowitsch, R Schroeder - Rna, 2007 - rnajournal.cshlp.org
Many RNA-binding proteins help RNAs to fold via their RNA chaperone activity. This term
has been used widely without accounting for the diversity of the observed reactions, which …
has been used widely without accounting for the diversity of the observed reactions, which …
Assembly of core helices and rapid tertiary folding of a small bacterial group I ribozyme
Compact but non-native intermediates have been implicated in the hierarchical folding of
several large RNAs, but there is little information on their structure. In this article …
several large RNAs, but there is little information on their structure. In this article …
RNA folding: models and perspectives
TR Sosnick, T Pan - Current Opinion in Structural Biology, 2003 - Elsevier
Intrinsic events during RNA folding include conformational search and metal ion binding.
Several experimentally testable models have been proposed to explain how large …
Several experimentally testable models have been proposed to explain how large …
Tertiary architecture of the Oceanobacillus iheyensis group II intron
N Toor, KS Keating, O Fedorova, K Rajashankar… - Rna, 2010 - rnajournal.cshlp.org
Group II introns are large ribozymes that act as self-splicing and retrotransposable RNA
molecules. They are of great interest because of their potential evolutionary relationship to …
molecules. They are of great interest because of their potential evolutionary relationship to …
RNA folding in living cells
G Zemora, C Waldsich - RNA biology, 2010 - Taylor & Francis
RNA folding is the most essential process underlying RNA function. While significant
progress has been made in understanding the forces driving RNA folding in vitro, exploring …
progress has been made in understanding the forces driving RNA folding in vitro, exploring …