Genetic and molecular exploration of maize environmental stress resilience: Toward sustainable agriculture

Z Yang, Y Cao, Y Shi, F Qin, C Jiang, S Yang - Molecular Plant, 2023 - cell.com
Global climate change exacerbates the effects of environmental stressors, such as drought,
flooding, extreme temperatures, salinity, and alkalinity, on crop growth and grain yield …

Low-temperature tolerance in land plants: Are transcript and membrane responses conserved?

SKK Raju, AC Barnes, JC Schnable, RL Roston - Plant science, 2018 - Elsevier
Plants' tolerance of low temperatures is an economically and ecologically important
limitation on geographic distributions and growing seasons. Tolerance for low temperatures …

A pan-grass transcriptome reveals patterns of cellular divergence in crops

B Guillotin, R Rahni, M Passalacqua, MA Mohammed… - Nature, 2023 - nature.com
Different plant species within the grasses were parallel targets of domestication, giving rise
to crops with distinct evolutionary histories and traits. Key traits that distinguish these species …

Natural variation in a type-A response regulator confers maize chilling tolerance

R Zeng, Z Li, Y Shi, D Fu, P Yin, J Cheng… - Nature …, 2021 - nature.com
Maize (Zea mays L.) is a cold-sensitive species that often faces chilling stress, which
adversely affects growth and reproduction. However, the genetic basis of low-temperature …

Natural polymorphism of ZmICE1 contributes to amino acid metabolism that impacts cold tolerance in maize

H Jiang, Y Shi, J Liu, Z Li, D Fu, S Wu, M Li, Z Yang… - Nature Plants, 2022 - nature.com
Cold stress negatively affects maize (Zea mays L.) growth, development and yield. Metabolic
adjustments contribute to the adaptation of maize under cold stress. We show here that the …

Evolutionarily informed deep learning methods for predicting relative transcript abundance from DNA sequence

JD Washburn, MK Mejia-Guerra… - Proceedings of the …, 2019 - National Acad Sciences
Deep learning methodologies have revolutionized prediction in many fields and show
potential to do the same in molecular biology and genetics. However, applying these …

Comparative evolutionary genetics of deleterious load in sorghum and maize

R Lozano, E Gazave, JPR Dos Santos, MG Stetter… - Nature Plants, 2021 - nature.com
Sorghum and maize share a close evolutionary history that can be explored through
comparative genomics,. To perform a large-scale comparison of the genomic variation …

Evolutionary and functional genomics of DNA methylation in maize domestication and improvement

G Xu, J Lyu, Q Li, H Liu, D Wang, M Zhang… - Nature …, 2020 - nature.com
DNA methylation is a ubiquitous chromatin feature, present in 25% of cytosines in the maize
genome, but variation and evolution of the methylation landscape during maize …

The genomic ecosystem of transposable elements in maize

MC Stitzer, SN Anderson, NM Springer… - PLoS …, 2021 - journals.plos.org
Transposable elements (TEs) constitute the majority of flowering plant DNA, reflecting their
tremendous success in subverting, avoiding, and surviving the defenses of their host …

Prediction of conserved and variable heat and cold stress response in maize using cis-regulatory information

P Zhou, TA Enders, ZA Myers, E Magnusson… - The Plant …, 2022 - academic.oup.com
Abstract Changes in gene expression are important for responses to abiotic stress.
Transcriptome profiling of heat-or cold-stressed maize genotypes identifies many changes in …