ADP-ribosylation from molecular mechanisms to therapeutic implications

MJ Suskiewicz, E Prokhorova, JGM Rack, I Ahel - Cell, 2023 - cell.com
ADP-ribosylation is a ubiquitous modification of biomolecules, including proteins and
nucleic acids, that regulates various cellular functions in all kingdoms of life. The recent …

ADP-ribosylation, a multifaceted posttranslational modification involved in the control of cell physiology in health and disease

B Lüscher, M Bütepage, L Eckei, S Krieg… - Chemical …, 2018 - ACS Publications
Posttranslational modifications (PTMs) regulate protein functions and interactions. ADP-
ribosylation is a PTM, in which ADP-ribosyltransferases use nicotinamide adenine …

Chemical mechanisms of histone lysine and arginine modifications

BC Smith, JM Denu - Biochimica et Biophysica Acta (BBA)-Gene Regulatory …, 2009 - Elsevier
Histone lysine and arginine residues are subject to a wide array of post-translational
modifications including methylation, citrullination, acetylation, ubiquitination, and …

Substrate-assisted catalysis by PARP10 limits its activity to mono-ADP-ribosylation

H Kleine, E Poreba, K Lesniewicz, PO Hassa… - Molecular cell, 2008 - cell.com
ADP-ribosylation controls many processes, including transcription, DNA repair, and bacterial
toxicity. ADP-ribosyltransferases and poly-ADP-ribose polymerases (PARPs) catalyze mono …

Enzymatic transition states and transition state analog design

VL Schramm - Annual review of biochemistry, 1998 - annualreviews.org
All chemical transformations pass through an unstable structure called the transition state,
which is poised between the chemical structures of the substrates and products. The …

A view at the millennium: the efficiency of enzymatic catalysis

TC Bruice - Accounts of Chemical Research, 2002 - ACS Publications
Binding TS in preference to S and increasing TΔ S‡ by freezing out motions in E⊙ S and
E⊙ TS have been accepted as the driving forces in enzymatic catalysis; however, the …

Mechanism of nicotinamide inhibition and transglycosidation by Sir2 histone/protein deacetylases

MD Jackson, MT Schmidt, NJ Oppenheimer… - Journal of Biological …, 2003 - ASBMB
Silent information regulator 2 (Sir2) enzymes catalyze NAD+-dependent protein/histone
deacetylation, where the acetyl group from the lysine ϵ-amino group is transferred to the …

Toward a Detailed Understanding of Base Excision Repair Enzymes:  Transition State and Mechanistic Analyses of N-Glycoside Hydrolysis and N-Glycoside …

PJ Berti, JAB McCann - Chemical reviews, 2006 - ACS Publications
This review focuses on the chemistry performed by base excision repair (BER) enzymes,
enzymes that remove nucleobases from DNA in the first step of the repair of many types of …

Evolution and mechanism from structures of an ADP-ribosylating toxin and NAD complex

S Han, JA Craig, CD Putnam, NB Carozzi… - Nature structural …, 1999 - nature.com
A member of the Bacillus-produced vegetative insecticidal proteins (VIPs) possesses high
specificity against the major insect pest, corn rootworms, and belongs to a class of binary …

Sirtuin chemical mechanisms

AA Sauve - Biochimica et Biophysica Acta (BBA)-Proteins and …, 2010 - Elsevier
Sirtuins are ancient proteins widely distributed in all lifeforms of earth. These proteins are
universally able to bind NAD+, and activate it to effect ADP-ribosylation of cellular …