Scientific workflows for computational reproducibility in the life sciences: Status, challenges and opportunities
With the development of new experimental technologies, biologists are faced with an
avalanche of data to be computationally analyzed for scientific advancements and …
avalanche of data to be computationally analyzed for scientific advancements and …
Expasy, the Swiss Bioinformatics Resource Portal, as designed by its users
Abstract The SIB Swiss Institute of Bioinformatics (https://www. sib. swiss) creates, maintains
and disseminates a portfolio of reliable and state-of-the-art bioinformatics services and …
and disseminates a portfolio of reliable and state-of-the-art bioinformatics services and …
UCSF ChimeraX: Structure visualization for researchers, educators, and developers
EF Pettersen, TD Goddard, CC Huang… - Protein …, 2021 - Wiley Online Library
UCSF ChimeraX is the next‐generation interactive visualization program from the Resource
for Biocomputing, Visualization, and Informatics (RBVI), following UCSF Chimera. ChimeraX …
for Biocomputing, Visualization, and Informatics (RBVI), following UCSF Chimera. ChimeraX …
UCSF ChimeraX: Meeting modern challenges in visualization and analysis
TD Goddard, CC Huang, EC Meng… - Protein …, 2018 - Wiley Online Library
UCSF ChimeraX is next‐generation software for the visualization and analysis of molecular
structures, density maps, 3D microscopy, and associated data. It addresses challenges in …
structures, density maps, 3D microscopy, and associated data. It addresses challenges in …
Analysis tool web services from the EMBL-EBI
Abstract Since 2004 the European Bioinformatics Institute (EMBL-EBI) has provided access
to a wide range of databases and analysis tools via Web Services interfaces. This comprises …
to a wide range of databases and analysis tools via Web Services interfaces. This comprises …
HMMER web server: interactive sequence similarity searching
HMMER is a software suite for protein sequence similarity searches using probabilistic
methods. Previously, HMMER has mainly been available only as a computationally …
methods. Previously, HMMER has mainly been available only as a computationally …
The Taverna workflow suite: designing and executing workflows of Web Services on the desktop, web or in the cloud
The Taverna workflow tool suite (http://www. taverna. org. uk) is designed to combine
distributed Web Services and/or local tools into complex analysis pipelines. These pipelines …
distributed Web Services and/or local tools into complex analysis pipelines. These pipelines …
Protein structure analysis of mutations causing inheritable diseases. An e-Science approach with life scientist friendly interfaces
H Venselaar, TAH Te Beek, RKP Kuipers… - BMC …, 2010 - Springer
Background Many newly detected point mutations are located in protein-coding regions of
the human genome. Knowledge of their effects on the protein's 3D structure provides insight …
the human genome. Knowledge of their effects on the protein's 3D structure provides insight …
Semantic web meets integrative biology: a survey
Integrative Biology (IB) uses experimental or computational quantitative technologies to
characterize biological systems at the molecular, cellular, tissue and population levels. IB …
characterize biological systems at the molecular, cellular, tissue and population levels. IB …
Rapid test and non-linear model characterisation of solid-state lithium-ion batteries
S Abu-Sharkh, D Doerffel - Journal of Power sources, 2004 - Elsevier
This paper describes a rapid test-procedure that can be used to derive parameters of a
proposed battery model. The battery model is a non-linear dynamic equivalent circuit model …
proposed battery model. The battery model is a non-linear dynamic equivalent circuit model …