Advanced applications of RNA sequencing and challenges
Next-generation sequencing technologies have revolutionarily advanced sequence-based
research with the advantages of high-throughput, high-sensitivity, and high-speed. RNA-seq …
research with the advantages of high-throughput, high-sensitivity, and high-speed. RNA-seq …
Mutational spectra of SARS-CoV-2 isolated from animals
Coronaviruses are ubiquitous and infect a wide spectrum of animals and humans. The
newly emerged severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) has …
newly emerged severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) has …
SnpHub: an easy-to-set-up web server framework for exploring large-scale genomic variation data in the post-genomic era with applications in wheat
W Wang, Z Wang, X Li, Z Ni, Z Hu, M Xin, H Peng… - …, 2020 - academic.oup.com
Background The cost of high-throughput sequencing is rapidly decreasing, allowing
researchers to investigate genomic variations across hundreds or even thousands of …
researchers to investigate genomic variations across hundreds or even thousands of …
Advances in molecular markers and their use in genetic improvement of wheat
Molecular markers such as RFLP, RAPD, AFLP, CAPS, DArT, SSR, SNP, etc. have been
widely used in wheat genetic studies but have their own limitations. More recent types of …
widely used in wheat genetic studies but have their own limitations. More recent types of …
AdmixPipe: population analyses in Admixture for non-model organisms
Background Research on the molecular ecology of non-model organisms, while previously
constrained, has now been greatly facilitated by the advent of reduced-representation …
constrained, has now been greatly facilitated by the advent of reduced-representation …
Genome Sequences of Populus tremula Chloroplast and Mitochondrion: Implications for Holistic Poplar Breeding
Complete Populus genome sequences are available for the nucleus (P. trichocarpa; section
Tacamahaca) and for chloroplasts (seven species), but not for mitochondria. Here, we …
Tacamahaca) and for chloroplasts (seven species), but not for mitochondria. Here, we …
MGIS: managing banana (Musa spp.) genetic resources information and high-throughput genotyping data
M Ruas, V Guignon, G Sempere, J Sardos, Y Hueber… - Database, 2017 - academic.oup.com
Unraveling the genetic diversity held in genebanks on a large scale is underway, due to
advances in Next-generation sequence (NGS) based technologies that produce high …
advances in Next-generation sequence (NGS) based technologies that produce high …
Naegleria genus pangenome reveals new structural and functional insights into the versatility of these free-living amoebae
A Dereeper, N Allouch, V Guerlais, M Garnier… - Frontiers in …, 2023 - frontiersin.org
Introduction Free-living amoebae of the Naegleria genus belong to the major protist clade
Heterolobosea and are ubiquitously distributed in soil and freshwater habitats. Of the 47 …
Heterolobosea and are ubiquitously distributed in soil and freshwater habitats. Of the 47 …
Complete chloroplast genome sequences of four Meliaceae species and comparative analyses
M Mader, B Pakull, C Blanc-Jolivet… - International Journal of …, 2018 - mdpi.com
The Meliaceae family mainly consists of trees and shrubs with a pantropical distribution. In
this study, the complete chloroplast genomes of four Meliaceae species were sequenced …
this study, the complete chloroplast genomes of four Meliaceae species were sequenced …
Aquaculture Molecular Breeding Platform (AMBP): a comprehensive web server for genotype imputation and genetic analysis in aquaculture
Q Zeng, B Zhao, H Wang, M Wang, M Teng… - Nucleic Acids …, 2022 - academic.oup.com
It is of vital importance to understand the population structure, dissect the genetic bases of
performance traits, and make proper strategies for selection in breeding programs. However …
performance traits, and make proper strategies for selection in breeding programs. However …