Interaction dynamics of intrinsically disordered proteins from single-molecule spectroscopy
A Chowdhury, D Nettels… - Annual review of …, 2023 - annualreviews.org
Many proteins contain large structurally disordered regions or are entirely disordered under
physiological conditions. The functions of these intrinsically disordered proteins (IDPs) often …
physiological conditions. The functions of these intrinsically disordered proteins (IDPs) often …
Single-molecule FRET for probing nanoscale biomolecular dynamics
Single-molecule spectroscopy is a powerful method for studying the physics of molecular
systems, particularly biomolecules, such as proteins and nucleic acids. By avoiding …
systems, particularly biomolecules, such as proteins and nucleic acids. By avoiding …
Rapid droplet-based mixing for single-molecule spectroscopy
T Yang, KJ Buholzer, A Sottini, X Cao, A deMello… - Nature …, 2023 - nature.com
Probing non-equilibrium dynamics with single-molecule spectroscopy is important for
dissecting biomolecular mechanisms. However, existing microfluidic rapid-mixing systems …
dissecting biomolecular mechanisms. However, existing microfluidic rapid-mixing systems …
Protein folding transition path times from single molecule FRET
Highlights•Single molecule FRET experiments determine average transition path
times.•Observed times are extremely close to those found in all-atom MD simulations.•Times …
times.•Observed times are extremely close to those found in all-atom MD simulations.•Times …
Recent advances in microfluidic technology for manipulation and analysis of biological cells (2007–2017)
The pivotal role of microfluidic technology in life science and biomedical research is now
widely recognized. Indeed, microfluidics as a research tool is unparalleled in terms of its …
widely recognized. Indeed, microfluidics as a research tool is unparalleled in terms of its …
Resolving distance variations by single-molecule FRET and EPR spectroscopy using rotamer libraries
Förster resonance energy transfer (FRET) and electron paramagnetic resonance (EPR)
spectroscopy are complementary techniques for quantifying distances in the nanometer …
spectroscopy are complementary techniques for quantifying distances in the nanometer …
Slow escape from a helical misfolded state of the pore-forming toxin cytolysin A
The pore-forming toxin cytolysin A (ClyA) is expressed as a large α-helical monomer that,
upon interaction with membranes, undergoes a major conformational rearrangement into …
upon interaction with membranes, undergoes a major conformational rearrangement into …
High-throughput, non-equilibrium studies of single biomolecules using glass-made nanofluidic devices
Single-molecule detection schemes offer powerful means to overcome static and dynamic
heterogeneity inherent to complex samples. However, probing biomolecular interactions …
heterogeneity inherent to complex samples. However, probing biomolecular interactions …
Mapping an equilibrium folding intermediate of the cytolytic pore toxin ClyA with single-molecule FRET
F Dingfelder, S Benke, D Nettels… - The Journal of Physical …, 2018 - ACS Publications
The 303-residue cytolytic toxin ClyA forms a stable α-helical monomer. In the presence of
detergents or membranes, however, the protein makes a large conformational transition to …
detergents or membranes, however, the protein makes a large conformational transition to …
Charge interactions can dominate coupled folding and binding on the ribosome
Interactions between emerging nascent polypeptide chains and the ribosome can modulate
cotranslational protein folding. However, it has remained unclear how such interactions can …
cotranslational protein folding. However, it has remained unclear how such interactions can …