Recent advances in the prediction of subcellular localization of proteins and related topics

K Nakai, L Wei - Frontiers in Bioinformatics, 2022 - frontiersin.org
Prediction of subcellular localization of proteins from their amino acid sequences has a long
history in bioinformatics and is still actively developing, incorporating the latest advances in …

Convolutional neural network-based artificial intelligence for classification of protein localization patterns

K Liimatainen, R Huttunen, L Latonen, P Ruusuvuori - Biomolecules, 2021 - mdpi.com
Identifying localization of proteins and their specific subpopulations associated with certain
cellular compartments is crucial for understanding protein function and interactions with …

Learning protein subcellular localization multi-view patterns from heterogeneous data of imaging, sequence and networks

G Wang, MQ Xue, HB Shen, YY Xu - Briefings in Bioinformatics, 2022 - academic.oup.com
Location proteomics seeks to provide automated high-resolution descriptions of protein
location patterns within cells. Many efforts have been undertaken in location proteomics over …

GraphLoc: a graph neural network model for predicting protein subcellular localization from immunohistochemistry images

JX Hu, Y Yang, YY Xu, HB Shen - Bioinformatics, 2022 - academic.oup.com
Motivation Recognition of protein subcellular distribution patterns and identification of
location biomarker proteins in cancer tissues are important for understanding protein …

Computational identification of surface markers for isolating distinct subpopulations from heterogeneous cancer cell populations

AL Gardner, TA Jost, D Morgan, A Brock - npj Systems Biology and …, 2024 - nature.com
Intratumor heterogeneity reduces treatment efficacy and complicates our understanding of
tumor progression and there is a pressing need to understand the functions of …

[HTML][HTML] Gestational Diabetes Mellitus-Induced Milk Fat Globule Membrane Protein Changes of Human Mature Milk Based on TMT Proteomic Analysis

Y Tao, Q Wang, M Xiao, H Li, H Wang, Z Mao… - Journal of Dairy …, 2024 - Elsevier
Breastfeeding by mothers with gestational diabetes mellitus (GDM) has been shown to
reduce maternal insulin demands and diminish the risks of diabetes in infants, leading to …

Improving protein subcellular location classification by incorporating three-dimensional structure information

G Wang, YJ Zhai, ZZ Xue, YY Xu - Biomolecules, 2021 - mdpi.com
The subcellular locations of proteins are closely related to their functions. In the past few
decades, the application of machine learning algorithms to predict protein subcellular …

Prediction of protein subcellular localization in single cells

X Zhang, Y Tseo, Y Bai, F Chen, C Uhler - bioRxiv, 2024 - biorxiv.org
The subcellular localization of a protein is important for its function and interaction with other
molecules, and its mislocalization is linked to numerous diseases. While atlas-scale efforts …

[PDF][PDF] CLCA1 is Poorly Expressed in Stomach Adenocarcinoma and Correlates with Immune Infiltration.

X Zhao, Y Chen, X Lu, ZN Cheng… - International Journal of …, 2024 - intjmorphol.com
Calcium-activated chloride channel regulator 1 (CLCA1) is associated with cancer
progression. The expression and immunologic function of CLCA1 in stomach …

CLCA1 se Expresa Deficientemente en el Adenocarcinoma de Estómago y se Correlaciona con la Infiltración Inmune

X Zhao, Y Chen, X Lu, ZN Cheng, J Lu - International Journal of …, 2024 - SciELO Chile
El regulador 1 del canal de cloruro activado por calcio (CLCA1) está asociado con la
progresión del cáncer. La expresión y la función inmunológica de CLCA1 en el …