Testate amoeba functional traits and their use in paleoecology

K Marcisz, VEJ Jassey, A Kosakyan… - Frontiers in Ecology …, 2020 - frontiersin.org
This review provides a synthesis of current knowledge on the morphological and functional
traits of testate amoebae, a polyphyletic group of protists commonly used as proxies of past …

Discrepancies between prokaryotes and eukaryotes need to be considered in soil DNA‐based studies

E Lara, D Singer, S Geisen - Environmental Microbiology, 2022 - Wiley Online Library
Metabarcoding approaches are exponentially increasing our understanding of soil
biodiversity, with a major focus on the bacterial part of the microbiome. Part of the soil …

Environmental filtering and phylogenetic clustering correlate with the distribution patterns of cryptic protist species

D Singer, A Kosakyan, CVW Seppey, A Pillonel… - Ecology, 2018 - Wiley Online Library
The community composition of any group of organisms should theoretically be determined
by a combination of assembly processes including resource partitioning, competition …

Soil protist diversity in the Swiss western Alps is better predicted by topo‐climatic than by edaphic variables

CVW Seppey, O Broennimann, A Buri… - Journal of …, 2020 - Wiley Online Library
Aim Trends in spatial patterns of diversity in macroscopic organisms can be well predicted
from correlative models, using topo‐climatic variables for plants and animals allowing …

Detection of rare and invasive freshwater fish species using eDNA pyrosequencing: Lake Iznik ichthyofauna revised

E Keskin, EM Unal, HH Atar - Biochemical Systematics and Ecology, 2016 - Elsevier
Assessment of fish biodiversity in freshwater environments is challenging, especially when
rare species or species with low population densities exist. Environmental DNA is becoming …

Taxonomic and functional traits responses of Sphagnum peatland testate amoebae to experimentally manipulated water table

I Koenig, M Mulot, EAD Mitchell - Ecological Indicators, 2018 - Elsevier
Biomonitoring tools are useful to assess the impact of environmental changes on the
functioning of ecosystems. Existing tools mostly require species identification, thus allowing …

Uncovering cryptic diversity in two amoebozoan species using complete mitochondrial genome sequences

K Fučíková, DJG Lahr - Journal of Eukaryotic Microbiology, 2016 - Wiley Online Library
The Amoebozoa are a major eukaryotic lineage that encompasses a wide range of
amoeboid organisms. The group is understudied from a systematic perspective: molecular …

Contemporary issues, current best practice and ways forward in soil protist ecology

S Geisen, E Lara, E Mitchell - Molecular Ecology Resources, 2023 - Wiley Online Library
Soil protists are increasingly studied due to a release from previous methodological
constraints and the acknowledgement of their immense diversity and functional importance …

Contrasted Micro-Eukaryotic Diversity Associated with Sphagnum Mosses in Tropical, Subtropical and Temperate Climatic Zones

D Singer, S Metz, F Unrein, S Shimano, Y Mazei… - Microbial ecology, 2019 - Springer
Sphagnum-dominated ecosystem plays major roles as carbon sinks at the global level.
Associated microbial communities, in particular, eukaryotes, play significant roles in nutrient …

[PDF][PDF] 环境DNA 在水域生态中的研究进展

赵明, 赵梦迪, 马春艳, 张凤英, 蒋科技, 王田… - 中国水产 …, 2018 - aquaticjournal.com
环境DNA (environmental DNA, eDNA) 是指生物通过皮肤脱落, 唾液, 配子,
粪便以及分泌物等方式向环境中释放的游离DNA. 环境DNA 具有敏感性, 准确性以及容易操作等 …