The Wnt pathway: from signaling mechanisms to synthetic modulators

EY Rim, H Clevers, R Nusse - Annual review of biochemistry, 2022 - annualreviews.org
The Wnt pathway is central to a host of developmental and disease-related processes. The
remarkable conservation of this intercellular signaling cascade throughout metazoan …

An integral program for tissue renewal and regeneration: Wnt signaling and stem cell control

H Clevers, KM Loh, R Nusse - science, 2014 - science.org
BACKGROUND In adult mammalian organisms, multiple tissues—including the skin, blood,
stomach, and intestines—are entrapped in a state of permanent regeneration; older cells are …

Ancient gene linkages support ctenophores as sister to other animals

DT Schultz, SHD Haddock, JV Bredeson, RE Green… - Nature, 2023 - nature.com
A central question in evolutionary biology is whether sponges or ctenophores (comb jellies)
are the sister group to all other animals. These alternative phylogenetic hypotheses imply …

Deeply conserved synteny and the evolution of metazoan chromosomes

O Simakov, J Bredeson, K Berkoff, F Marletaz… - Science …, 2022 - science.org
Animal genomes show networks of deeply conserved gene linkages whose phylogenetic
scope and chromosomal context remain unclear. Here, we report chromosome-scale …

Revisions to the classification, nomenclature, and diversity of eukaryotes

SM Adl, D Bass, CE Lane, J Lukeš… - Journal of Eukaryotic …, 2019 - Wiley Online Library
This revision of the classification of eukaryotes follows that of Adl et al., 2012 [J. Euk.
Microbiol. 59 (5)] and retains an emphasis on protists. Changes since have improved the …

Reconstruction of proto-vertebrate, proto-cyclostome and proto-gnathostome genomes provides new insights into early vertebrate evolution

Y Nakatani, P Shingate, V Ravi, NE Pillai… - Nature …, 2021 - nature.com
Ancient polyploidization events have had a lasting impact on vertebrate genome structure,
organization and function. Some key questions regarding the number of ancient …

Comparative genomics of the major parasitic worms

Nature genetics, 2019 - nature.com
Parasitic nematodes (roundworms) and platyhelminths (flatworms) cause debilitating
chronic infections of humans and animals, decimate crop production and are a major …

A large and consistent phylogenomic dataset supports sponges as the sister group to all other animals

P Simion, H Philippe, D Baurain, M Jager, DJ Richter… - Current biology, 2017 - cell.com
Resolving the early diversification of animal lineages has proven difficult, even using
genome-scale datasets. Several phylogenomic studies have supported the classical …

Topological structures and syntenic conservation in sea anemone genomes

B Zimmermann, JD Montenegro, SMC Robb… - Nature …, 2023 - nature.com
There is currently little information about the evolution of gene clusters, genome
architectures and karyotypes in early branching animals. Slowly evolving anthozoan …

Homeodomain proteins: an update

TR Bürglin, M Affolter - Chromosoma, 2016 - Springer
Here, we provide an update of our review on homeobox genes that we wrote together with
Walter Gehring in 1994. Since then, comprehensive surveys of homeobox genes have …