The new (dis) order in RNA regulation
AI Järvelin, M Noerenberg, I Davis… - Cell Communication and …, 2016 - Springer
RNA-binding proteins play a key role in the regulation of all aspects of RNA metabolism,
from the synthesis of RNA to its decay. Protein-RNA interactions have been thought to be …
from the synthesis of RNA to its decay. Protein-RNA interactions have been thought to be …
The ins and outs of lncRNA structure: How, why and what comes next?
The field of structural biology has the unique advantage of being able to provide a
comprehensive picture of biological mechanisms at the molecular and atomic level. Long …
comprehensive picture of biological mechanisms at the molecular and atomic level. Long …
Structured states of disordered proteins from genomic sequences
Protein flexibility ranges from simple hinge movements to functional disorder. Around half of
all human proteins contain apparently disordered regions with little 3D or functional …
all human proteins contain apparently disordered regions with little 3D or functional …
Native top-down mass spectrometry uncovers two distinct binding motifs of a functional neomycin-sensing riboswitch aptamer
SV Heel, K Bartosik, F Juen, C Kreutz… - Journal of the …, 2023 - ACS Publications
Understanding how ligands bind to ribonucleic acids (RNA) is important for understanding
RNA recognition in biological processes and drug development. Here, we have studied …
RNA recognition in biological processes and drug development. Here, we have studied …
HIV-1 Tat interactions with cellular 7SK and viral TAR RNAs identifies dual structural mimicry
VV Pham, C Salguero, SN Khan, JL Meagher… - Nature …, 2018 - nature.com
The HIV Tat protein competes with the 7SK: HEXIM interaction to hijack pTEFb from 7SK
snRNP and recruit it to the TAR motif on stalled viral transcripts. Here we solve structures of …
snRNP and recruit it to the TAR motif on stalled viral transcripts. Here we solve structures of …
Small molecules targeting viral RNA
G Mathez, V Cagno - International Journal of Molecular Sciences, 2023 - mdpi.com
The majority of antivirals available target viral proteins; however, RNA is emerging as a new
and promising antiviral target due to the presence of highly structured RNA in viral genomes …
and promising antiviral target due to the presence of highly structured RNA in viral genomes …
[HTML][HTML] HIV Rev assembly on the Rev response element (RRE): a structural perspective
JW Rausch, SFJ Le Grice - Viruses, 2015 - mdpi.com
HIV-1 Rev is an~ 13 kD accessory protein expressed during the early stage of virus
replication. After translation, Rev enters the nucleus and binds the Rev response element …
replication. After translation, Rev enters the nucleus and binds the Rev response element …
HIV Rev-isited
CTS Truman, A Järvelin, I Davis… - Open Biology, 2020 - royalsocietypublishing.org
The human immunodeficiency virus type 1 (HIV-1) proteome is expressed from alternatively
spliced and unspliced genomic RNAs. However, HIV-1 RNAs that are not fully spliced are …
spliced and unspliced genomic RNAs. However, HIV-1 RNAs that are not fully spliced are …
The HIV-1 Rev response element (RRE) adopts alternative conformations that promote different rates of virus replication
C Sherpa, JW Rausch, SFJ Le Grice… - Nucleic acids …, 2015 - academic.oup.com
The HIV Rev protein forms a complex with a 351 nucleotide sequence present in unspliced
and incompletely spliced human immunodeficiency virus (HIV) mRNAs, the Rev response …
and incompletely spliced human immunodeficiency virus (HIV) mRNAs, the Rev response …
Human retrovirus genomic RNA packaging
Two non-covalently linked copies of the retrovirus genome are specifically recruited to the
site of virus particle assembly and packaged into released particles. Retroviral RNA …
site of virus particle assembly and packaged into released particles. Retroviral RNA …