Stabilizing biocatalysts
AS Bommarius, MF Paye - Chemical Society Reviews, 2013 - pubs.rsc.org
The area of biocatalysis itself is in rapid development, fueled by both an enhanced
repertoire of protein engineering tools and an increasing list of solved problems …
repertoire of protein engineering tools and an increasing list of solved problems …
Rational design of enzyme activity and enantioselectivity
The strategy of rational design to engineer enzymes is to predict the potential mutants based
on the understanding of the relationships between protein structure and function, and …
on the understanding of the relationships between protein structure and function, and …
Stability effects of mutations and protein evolvability
N Tokuriki, DS Tawfik - Current opinion in structural biology, 2009 - Elsevier
The past several years have seen novel insights at the interface of protein biophysics and
evolution. The accepted paradigm that proteins can tolerate nearly any amino acid …
evolution. The accepted paradigm that proteins can tolerate nearly any amino acid …
Role of distal sites in enzyme engineering
J Gu, Y Xu, Y Nie - Biotechnology Advances, 2023 - Elsevier
The limitations associated with natural enzyme catalysis have triggered the rise of the field of
protein engineering. Traditional rational design was based on the analysis of protein …
protein engineering. Traditional rational design was based on the analysis of protein …
Engineering functional thermostable proteins using ancestral sequence reconstruction
RES Thomson, SE Carrera-Pacheco… - Journal of Biological …, 2022 - ASBMB
Natural proteins are often only slightly more stable in the native state than the denatured
state, and an increase in environmental temperature can easily shift the balance toward …
state, and an increase in environmental temperature can easily shift the balance toward …
Engineering highly functional thermostable proteins using ancestral sequence reconstruction
Y Gumulya, JM Baek, SJ Wun, RES Thomson… - Nature Catalysis, 2018 - nature.com
Commercial biocatalysis requires robust enzymes that can withstand elevated temperatures
and long incubations. Ancestral reconstruction has shown that pre-Cambrian enzymes were …
and long incubations. Ancestral reconstruction has shown that pre-Cambrian enzymes were …
Engineering proteins for thermostability through rigidifying flexible sites
Engineering proteins for thermostability is an exciting and challenging field since it is critical
for broadening the industrial use of recombinant proteins. Thermostability of proteins arises …
for broadening the industrial use of recombinant proteins. Thermostability of proteins arises …
Exploring the past and the future of protein evolution with ancestral sequence reconstruction: the 'retro'approach to protein engineering
Y Gumulya, EMJ Gillam - Biochemical Journal, 2017 - portlandpress.com
A central goal in molecular evolution is to understand the ways in which genes and proteins
evolve in response to changing environments. In the absence of intact DNA from fossils …
evolve in response to changing environments. In the absence of intact DNA from fossils …
SpyTag/SpyCatcher cyclization confers resilience to boiling on a mesophilic enzyme
C Schoene, JO Fierer, SP Bennett… - Angewandte Chemie …, 2014 - Wiley Online Library
SpyTag is a peptide that spontaneously forms an amide bond with its protein partner
SpyCatcher. SpyTag was fused at the N terminus of β‐lactamase and SpyCatcher at the C …
SpyCatcher. SpyTag was fused at the N terminus of β‐lactamase and SpyCatcher at the C …
Intense neutral drifts yield robust and evolvable consensus proteins
S Bershtein, K Goldin, DS Tawfik - Journal of molecular biology, 2008 - Elsevier
What changes occur when a natural protein that had been under low mutation rates is
subjected to a neutral drift at high mutational loads, thus generating genetically diverse …
subjected to a neutral drift at high mutational loads, thus generating genetically diverse …