Solution scattering approaches to dynamical ordering in biomolecular systems

P Bernadó, N Shimizu, G Zaccai, H Kamikubo… - … et Biophysica Acta (BBA …, 2018 - Elsevier
Clarification of solution structure and its modulation in proteins and protein complexes is
crucially important to understand dynamical ordering in macromolecular systems. Small …

Biophysical characterization of dynamic structures of immunoglobulin G

S Yanaka, R Yogo, K Kato - Biophysical Reviews, 2020 - Springer
Immunoglobulin G (IgG) is a major antibody and functions as a hub linking specific antigen
binding and recruitment of effector molecules typified by Fcγ receptors (FcγRs). These …

The Fab portion of immunoglobulin G contributes to its binding to Fcγ receptor III

R Yogo, Y Yamaguchi, H Watanabe, H Yagi, T Satoh… - Scientific reports, 2019 - nature.com
Most cells active in the immune system express receptors for antibodies which mediate a
variety of defensive mechanisms. These receptors interact with the Fc portion of the antibody …

The solution structure of the unbound IgG Fc receptor CD64 resembles its crystal structure: Implications for function

GK Hui, X Gao, J Gor, J Lu, PD Sun, SJ Perkins - Plos one, 2023 - journals.plos.org
FcγRI (CD64) is the only high-affinity Fcγ receptor found on monocytes, macrophages,
eosinophils, neutrophils and dendritic cells. It binds immunoglobulin G (IgG) antibody …

Overall structure of fully assembled cyanobacterial KaiABC circadian clock complex by an integrated experimental-computational approach

Y Yunoki, A Matsumoto, K Morishima, A Martel… - Communications …, 2022 - nature.com
In the cyanobacterial circadian clock system, KaiA, KaiB and KaiC periodically assemble
into a large complex. Here we determined the overall structure of their fully assembled …

Structure and dynamics of immunoglobulin G glycoproteins

H Yagi, S Yanaka, K Kato - Glycobiophysics, 2018 - Springer
Immunoglobulin G (IgG) is a major serum glycoprotein that exerts the role of antibody in the
immune system. This multifunctional glycoprotein couples antigen recognition with a variety …

Supramolecular tholos-like architecture constituted by archaeal proteins without functional annotation

M Yagi-Utsumi, A Sikdar, C Song, J Park, R Inoue… - Scientific Reports, 2020 - nature.com
Euryarchaeal genomes encode proteasome-assembling chaperone homologs, PbaA and
PbaB, although archaeal proteasome formation is a chaperone-independent process …

[HTML][HTML] Quantitative analysis of therapeutic antibody interactions with Fcγ receptors using high-speed atomic force microscopy

S Yanaka, H Watanabe, R Yogo… - Biological and …, 2024 - jstage.jst.go.jp
This study employed high-speed atomic force microscopy to quantitatively analyze the
interactions between therapeutic antibodies and Fcγ receptors (FcγRs). Antibodies are …

CH2 domain orientation of human immunoglobulin G in solution: Structural comparison of glycosylated and aglycosylated Fc regions using small-angle X-ray …

S Yageta, H Imamura, R Shibuya, S Honda - MAbs, 2019 - Taylor & Francis
The N-linked glycan in immunoglobulin G is critical for the stability and function of the
crystallizable fragment (Fc) region. Alteration of these protein properties upon the removal of …

A feasibility study of inverse contrast-matching small-angle neutron scattering method combined with size exclusion chromatography using antibody interactions as …

N Sato, R Yogo, S Yanaka, A Martel… - The journal of …, 2021 - academic.oup.com
Small-angle neutron scattering (SANS) and small-angle X-ray scattering (SAXS) are
powerful techniques for the structural characterization of biomolecular complexes. In …