Tumor mutational burden as a predictive biomarker in solid tumors

D Sha, Z Jin, J Budczies, K Kluck, A Stenzinger… - Cancer discovery, 2020 - AACR
Tumor mutational burden (TMB), defined as the number of somatic mutations per megabase
of interrogated genomic sequence, varies across malignancies. Panel sequencing–based …

Somatic genomic testing in patients with metastatic or advanced cancer: ASCO provisional clinical opinion

D Chakravarty, A Johnson, J Sklar… - Journal of Clinical …, 2022 - ascopubs.org
PURPOSE An ASCO provisional clinical opinion offers timely clinical direction to ASCO's
membership following publication or presentation of potentially practice-changing data from …

Integration of the Drug–Gene Interaction Database (DGIdb 4.0) with open crowdsource efforts

SL Freshour, S Kiwala, KC Cotto… - Nucleic acids …, 2021 - academic.oup.com
Abstract The Drug-Gene Interaction Database (DGIdb, www. dgidb. org) is a web resource
that provides information on drug-gene interactions and druggable genes from publications …

Phase IIa study of SurVaxM plus adjuvant temozolomide for newly diagnosed glioblastoma

MS Ahluwalia, DA Reardon, AP Abad… - Journal of Clinical …, 2023 - ascopubs.org
PURPOSE Despite intensive treatment with surgery, radiation therapy, temozolomide (TMZ)
chemotherapy, and tumor-treating fields, mortality of newly diagnosed glioblastoma (nGBM) …

Spatial and temporal heterogeneity of PD-L1 expression and tumor mutational burden in gastroesophageal adenocarcinoma at baseline diagnosis and after …

KI Zhou, B Peterson, A Serritella, J Thomas… - Clinical Cancer …, 2020 - AACR
Purpose: Intrapatient heterogeneity of programmed death ligand 1 (PD-L1) expression and
tumor mutational burden (TMB) in gastroesophageal adenocarcinoma (GEA) could …

Assessment of tumor mutational burden and outcomes in patients with diverse advanced cancers treated with immunotherapy

C Aggarwal, R Ben-Shachar, Y Gao… - JAMA network …, 2023 - jamanetwork.com
Importance There are few studies assessing the association of tumor mutational burden
(TMB) and clinical outcomes in a large cohort of patients with diverse advanced cancers …

Landscape of KRASG12C, Associated Genomic Alterations, and Interrelation With Immuno-Oncology Biomarkers in KRAS-Mutated Cancers

ME Salem, SM El-Refai, W Sha, A Puccini… - JCO Precision …, 2022 - ascopubs.org
PURPOSE Promising single-agent activity from sotorasib and adagrasib in KRAS G12C-
mutant tumors has provided clinical evidence of effective KRAS signaling inhibition …

A pan-cancer organoid platform for precision medicine

BM Larsen, M Kannan, LF Langer, BD Leibowitz… - Cell reports, 2021 - cell.com
Patient-derived tumor organoids (TOs) are emerging as high-fidelity models to study cancer
biology and develop novel precision medicine therapeutics. However, utilizing TOs for …

Challenges and opportunities associated with the MD Anderson IMPACT2 randomized study in precision oncology

HH Vo, S Fu, DS Hong, DD Karp, S Piha-Paul… - npj Precision …, 2022 - nature.com
We investigated the challenges of conducting IMPACT2, an ongoing randomized study that
evaluates molecular testing and targeted therapy (ClinicalTrials. gov: NCT02152254) …

Refining colorectal cancer classification and clinical stratification through a single-cell atlas

AM Khaliq, C Erdogan, Z Kurt, SS Turgut, MW Grunvald… - Genome biology, 2022 - Springer
Background Colorectal cancer (CRC) consensus molecular subtypes (CMS) have different
immunological, stromal cell, and clinicopathological characteristics. Single-cell …