Biological databases for human research
The completion of the Human Genome Project lays a foundation for systematically studying
the human genome from evolutionary history to precision medicine against diseases. With …
the human genome from evolutionary history to precision medicine against diseases. With …
EPSD: a well-annotated data resource of protein phosphorylation sites in eukaryotes
As an important post-translational modification (PTM), protein phosphorylation is involved in
the regulation of almost all of biological processes in eukaryotes. Due to the rapid progress …
the regulation of almost all of biological processes in eukaryotes. Due to the rapid progress …
PLMD: an updated data resource of protein lysine modifications
Post-translational modifications (PTMs) occurring at protein lysine residues, or protein lysine
modifications (PLMs), play critical roles in regulating biological processes. Due to the …
modifications (PLMs), play critical roles in regulating biological processes. Due to the …
qPTM: an updated database for PTM dynamics in human, mouse, rat and yeast
K Yu, Y Wang, Y Zheng, Z Liu, Q Zhang… - Nucleic Acids …, 2023 - academic.oup.com
Post-translational modifications (PTMs) are critical molecular mechanisms that regulate
protein functions temporally and spatially in various organisms. Since most PTMs are …
protein functions temporally and spatially in various organisms. Since most PTMs are …
Protein phosphorylation database and prediction tools
MX Zhao, Q Chen, F Li, S Fu, B Huang… - Briefings in …, 2023 - academic.oup.com
Protein phosphorylation, one of the main protein post-translational modifications, is required
for regulating various life activities. Kinases and phosphatases that regulate protein …
for regulating various life activities. Kinases and phosphatases that regulate protein …
qPTMplants: an integrative database of quantitative post-translational modifications in plants
H Xue, Q Zhang, P Wang, B Cao, C Jia… - Nucleic Acids …, 2022 - academic.oup.com
As a crucial molecular mechanism, post-translational modifications (PTMs) play critical roles
in a wide range of biological processes in plants. Recent advances in mass spectrometry …
in a wide range of biological processes in plants. Recent advances in mass spectrometry …
Accurate in silico prediction of species-specific methylation sites based on information gain feature optimization
PP Wen, SP Shi, HD Xu, LN Wang, JD Qiu - Bioinformatics, 2016 - academic.oup.com
As one of the most important reversible types of post-translational modification, protein
methylation catalyzed by methyltransferases carries many pivotal biological functions as …
methylation catalyzed by methyltransferases carries many pivotal biological functions as …
Genetic analysis of rare human variants of regulators of G protein signaling proteins and their role in human physiology and disease
KE Squires, C Montañez-Miranda, RR Pandya… - Pharmacological …, 2018 - ASPET
Regulators of G protein signaling (RGS) proteins modulate the physiologic actions of many
neurotransmitters, hormones, and other signaling molecules. Human RGS proteins …
neurotransmitters, hormones, and other signaling molecules. Human RGS proteins …
dbPAF: an integrative database of protein phosphorylation in animals and fungi
Protein phosphorylation is one of the most important post-translational modifications (PTMs)
and regulates a broad spectrum of biological processes. Recent progresses in …
and regulates a broad spectrum of biological processes. Recent progresses in …
qPhos: a database of protein phosphorylation dynamics in humans
Temporal and spatial protein phosphorylation dynamically orchestrates a broad spectrum of
biological processes and plays various physiological and pathological roles in diseases and …
biological processes and plays various physiological and pathological roles in diseases and …