MM-CCNB: Essential protein prediction using MAX-MIN strategies and compartment of common neighboring approach

AK Payra, B Saha, A Ghosh - Computer Methods and Programs in …, 2023 - Elsevier
Background and objective Proteins are indispensable for the flow of the life of living
organisms. Protein pairs in interaction exhibit more functional activities than individuals …

Deep contextual representation learning for identifying essential proteins via integrating multisource protein features

W Li, W Liu, Y Guo, B Wang… - Chinese Journal of …, 2023 - ieeexplore.ieee.org
Essential proteins with biological functions are necessary for the survival of organisms.
Computational recognition methods of essential proteins can reduce the workload and …

MEM‐FET: Essential protein prediction using membership feature and machine learning approach

AK Payra, B Saha, A Ghosh - Proteins: Structure, Function, and …, 2024 - Wiley Online Library
Proteins are played key roles in different functionalities in our daily life. All functional roles of
a protein are a bit enhanced in interaction compared to individuals. Identification of essential …

Refining protein interaction network for identifying essential proteins

H Zhang, Z Feng, C Wu - Current Bioinformatics, 2023 - ingentaconnect.com
Aim: The study aimed to reconstruct the protein-protein interaction network for the
identification of essential proteins. Background: In a living organism, essential proteins play …

A Non-local Graph Neural Network for Identification of Essential Proteins

H Zhang, Z Feng, C Wu - 2022 International Joint Conference …, 2022 - ieeexplore.ieee.org
Identification of essential proteins is a hot topic in bioinformatics. In recent years, various
traditional methods have been proposed, which usually take topological features to rank the …

A Novel Method for Targeted Identification of Essential Proteins by Integrating Chemical Reaction Optimization and Naive Bayes Model

W Yang, S Zou, H Gao, L Wang… - IEEE/ACM Transactions …, 2024 - ieeexplore.ieee.org
Targeted identification of essential proteins is of great significance for species identification,
drug manufacturing, and disease treatment. It is a challenge to analyze the binding …

Ortho_Sim_Loc: essential protein prediction using orthology and priority-based similarity approach

AK Payra, B Saha, A Ghosh - Computational Biology and Chemistry, 2021 - Elsevier
Proteins are the essential macro-molecules of living organism. But all proteins cannot be
considered as essential in different relevant studies. Essentiality of a protein is thus …