[HTML][HTML] Phenotyping for drought tolerance of crops in the genomics era

R Tuberosa - Frontiers in physiology, 2012 - frontiersin.org
Improving crops yield under water-limited conditions is the most daunting challenge faced
by breeders. To this end, accurate, relevant phenotyping plays an increasingly pivotal role …

[HTML][HTML] Genotyping-by-sequencing in plants

S Deschamps, V Llaca, GD May - Biology, 2012 - mdpi.com
The advent of next-generation DNA sequencing (NGS) technologies has led to the
development of rapid genome-wide Single Nucleotide Polymorphism (SNP) detection …

[HTML][HTML] Development and evaluation of a barley 50k iSelect SNP array

MM Bayer, P Rapazote-Flores, M Ganal… - Frontiers in plant …, 2017 - frontiersin.org
High-throughput genotyping arrays continue to be an attractive, cost-effective alternative to
sequencing based approaches. We have developed a new 50k Illumina Infinium iSelect …

[HTML][HTML] Development and implementation of high-throughput SNP genotyping in barley

TJ Close, PR Bhat, S Lonardi, Y Wu, N Rostoks… - BMC genomics, 2009 - Springer
Background High density genetic maps of plants have, nearly without exception, made use
of marker datasets containing missing or questionable genotype calls derived from a variety …

Cereal breeding takes a walk on the wild side

C Feuillet, P Langridge, R Waugh - Trends in genetics, 2008 - cell.com
Elite cultivated crop gene pools of the Triticeae tribe (wheat, barley and rye) exhibit limited
genetic diversity, raising concerns about our ability to increase or simply sustain crop yield …

Comparative assessment of EST-SSR, EST-SNP and AFLP markers for evaluation of genetic diversity and conservation of genetic resources using wild, cultivated and …

RK Varshney, K Chabane, PS Hendre, RK Aggarwal… - Plant Science, 2007 - Elsevier
A set of 16 expressed sequence tag (EST)-derived simple sequence repeat (SSR) and 15
EST-derived single nucleotide polymorphism (SNP) markers together with 4 amplified …

[图书][B] Molecular plant breeding

Y Xu - 2010 - books.google.com
Recent advances in plant genomics and molecular biology have revolutionized our
understanding of plant genetics, providing new opportunities for more efficient and …

Genome-wide association mapping: a case study in bread wheat (Triticum aestivum L.)

K Neumann, B Kobiljski, S Denčić, RK Varshney… - Molecular …, 2011 - Springer
Association-based trait mapping is an innovative methodology based on linkage
disequilibrium. Studies in plants, especially in cereals, are rare. A genome-wide association …

[HTML][HTML] The USDA barley core collection: genetic diversity, population structure, and potential for genome-wide association studies

M Muñoz-Amatriaín, A Cuesta-Marcos, JB Endelman… - PloS one, 2014 - journals.plos.org
New sources of genetic diversity must be incorporated into plant breeding programs if they
are to continue increasing grain yield and quality, and tolerance to abiotic and biotic …

A high density barley microsatellite consensus map with 775 SSR loci

RK Varshney, TC Marcel, L Ramsay, J Russell… - theoretical and Applied …, 2007 - Springer
A microsatellite or simple sequence repeat (SSR) consensus map of barley was constructed
by joining six independent genetic maps based on the mapping populations 'Igri× …