RADseq approaches and applications for forest tree genetics

TL Parchman, JP Jahner, KA Uckele… - Tree Genetics & …, 2018 - Springer
As tree species vary extensively in genome size, complexity, and resource development,
reduced representation methods have been increasingly employed for the generation of …

Genetic resistance to white pine blister rust, restoration options, and potential use of biotechnology

RA Sniezko, JJ Liu - Forest Ecology and Management, 2022 - Elsevier
All nine five-needle white pine species (genus Pinus, subgenus Strobus, subsections
Strobus and Balfourianae) native to the US and Canada are highly susceptible to white pine …

Sequential hybridization may have facilitated ecological transitions in the Southwestern pinyon pine syngameon

R Buck, D Ortega‐Del Vecchyo, C Gehring… - New …, 2023 - Wiley Online Library
Multispecies interbreeding networks, or syngameons, have been increasingly reported in
natural systems. However, the formation, structure, and maintenance of syngameons have …

Improving species delimitation for effective conservation: a case study in the endemic maple‐leaf oak (Quercus acerifolia)

Y Wu, AL Hipp, G Fargo, N Stith, RE Ricklefs - New Phytologist, 2023 - Wiley Online Library
Species delimitation is challenging in lineages that exhibit both high plasticity and
introgression. This challenge can be compounded by collection biases, which may …

Effective double‐digest RAD sequencing and genotyping despite large genome size

R Gargiulo, T Kull, MF Fay - Molecular Ecology Resources, 2021 - Wiley Online Library
Obtaining informative data is the ambition of any genomic project, but in nonmodel species
with very large genomes, pursuing such a goal requires surmounting a series of analytical …

Great Basin bristlecone pine mortality: Causal factors and management implications

BJ Bentz, CI Millar, JC Vandygriff… - Forest Ecology and …, 2022 - Elsevier
High-elevation five-needle pines are foundational species and iconic components of
subalpine forests across western North America. Because they often grow at environmental …

Combining mitochondrial and nuclear genome analyses to dissect the effects of colonization, environment, and geography on population structure in Pinus …

H Xia, B Wang, W Zhao, J Pan, JF Mao… - Evolutionary …, 2018 - Wiley Online Library
The phylogeographic histories of plants in East Asia are complex and shaped by both past
large‐scale climatic oscillations and dramatic tectonic events. The impact of these historic …

RAD‐sequencing reveals patterns of diversification and hybridization, and the accumulation of reproductive isolation in a clade of partially sympatric, tropical island …

AG Linan, PP Lowry, AJ Miller, GE Schatz… - Molecular …, 2021 - Wiley Online Library
A common pattern observed in temperate tree clades is that species are often
morphologically distinct and partially interfertile but maintain species cohesion despite …

Integrating forest health conditions and species adaptive capacities to infer future trajectories of the high elevation five-needle white pines

AW Schoettle, KS Burns, ST McKinney… - Forest Ecology and …, 2022 - Elsevier
Tree mortality rates have been increasing globally with mountainous regions experiencing
higher temperatures and impacts from the expansion and intensification of pests and …

Limber pine (Pinus flexilis James) genetic map constructed by exome‐seq provides insight into the evolution of disease resistance and a genomic resource for …

JJ Liu, AW Schoettle, RA Sniezko, F Yao… - The Plant …, 2019 - Wiley Online Library
Limber pine (Pinus flexilis) is a keystone species of high‐elevation forest ecosystems of
western North America, but some parts of the geographic range have high infection and …