The challenge of HIV-1 subtype diversity

BS Taylor, ME Sobieszczyk… - … England Journal of …, 2008 - Mass Medical Soc
HIV-1 has evolved multiple mechanisms to elude immune control. The view of virus as
classifiable into distinct subtypes needs to reflect the reality of the constant emergence of …

HIV‐1 genetic variability and clinical implications

MM Santoro, CF Perno - International Scholarly Research …, 2013 - Wiley Online Library
Despite advances in antiretroviral therapy that have revolutionized HIV disease
management, effective control of the HIV infection pandemic remains elusive. Beyond the …

COMET: adaptive context-based modeling for ultrafast HIV-1 subtype identification

D Struck, G Lawyer, AM Ternes, JC Schmit… - Nucleic acids …, 2014 - academic.oup.com
Viral sequence classification has wide applications in clinical, epidemiological, structural
and functional categorization studies. Most existing approaches rely on an initial alignment …

Virologic and immunologic determinants of heterosexual transmission of human immunodeficiency virus type 1 in Africa

ÜS Fideli, SA Allen, R Musonda, S Trask… - AIDS research and …, 2001 - liebertpub.com
More than 80% of the world's HIV-infected adults live in sub-Saharan Africa, where
heterosexual transmission is the predominant mode of spread. The virologic and …

Lower human immunodeficiency virus (HIV) type 2 viral load reflects the difference in pathogenicity of HIV-1 and HIV-2

SJ Popper, AD Sarr, KU Travers… - The Journal of …, 1999 - academic.oup.com
Human immunodeficiency virus type 2 (HIV-2) is less pathogenic than HIV type 1 (HIV-1),
but the mechanisms underlying this difference have not been defined. We developed an …

Effect of human immunodeficiency virus Type 1 (HIV-1) subtype on disease progression in persons from Rakai, Uganda, with incident HIV-1 infection

N Kiwanuka, O Laeyendecker, M Robb… - The Journal of …, 2008 - academic.oup.com
Background. Human immunodeficiency virus type 1 (HIV-1) subtypes differ in biological
characteristics that may affect pathogenicity. Methods. We determined the HIV-1 subtype …

HIV-1 subtype D infection is associated with faster disease progression than subtype A in spite of similar plasma HIV-1 loads

JM Baeten, B Chohan, L Lavreys… - The Journal of …, 2007 - academic.oup.com
We investigated the effect of human immunodeficiency virus type 1 (HIV-1) subtype on
disease progression among 145 Kenyan women followed from the time of HIV-1 acquisition …

Effect of human immunodeficiency virus (HIV) type 1 envelope subtypes A and D on disease progression in a large cohort of HIV-1—positive persons in Uganda

P Kaleebu, N French, C Mahe, D Yirrell… - The Journal of …, 2002 - academic.oup.com
The effect of human immunodeficiency virus (HIV) type 1 envelope subtypes A and D on
disease progression was investigated in 1045 adults in Uganda. At enrollment and every 6 …

Impact of clade diversity on HIV-1 virulence, antiretroviral drug sensitivity and drug resistance

S Spira, MA Wainberg, H Loemba… - Journal of …, 2003 - academic.oup.com
HIV-1 infection is characterized by genetic diversity wherein distinct viral subtypes (clades A,
B, C, D, E, F, G, K and O) are expanding in different geographical regions. This article deals …

Molecular epidemiology of HIV-1 genetic forms and its significance for vaccine development and therapy

MM Thomson, L Pérez-Álvarez… - The Lancet infectious …, 2002 - thelancet.com
Since their initial expansion in human beings roughly seven decades ago in central Africa,
the HIV-1 pandemic strains have diversified extensively through mutation and …