Chloroplast genomes: diversity, evolution, and applications in genetic engineering

H Daniell, CS Lin, M Yu, WJ Chang - Genome biology, 2016 - Springer
Chloroplasts play a crucial role in sustaining life on earth. The availability of over 800
sequenced chloroplast genomes from a variety of land plants has enhanced our …

The Latest Studies on Lotus (Nelumbo nucifera)-an Emerging Horticultural Model Plant

Z Lin, C Zhang, D Cao, RN Damaris… - International journal of …, 2019 - mdpi.com
Lotus (Nelumbo nucifera) is a perennial aquatic basal eudicot belonging to a small family
Nelumbonaceace, which contains only one genus with two species. It is an important …

Diversification of Rosaceae since the Late Cretaceous based on plastid phylogenomics

SD Zhang, JJ Jin, SY Chen, MW Chase… - New …, 2017 - Wiley Online Library
Phylogenetic relationships in Rosaceae have long been problematic because of frequent
hybridisation, apomixis and presumed rapid radiation, and their historical diversification has …

What can we do with 1000 plastid genomes?

J Tonti‐Filippini, PG Nevill, K Dixon, I Small - The Plant Journal, 2017 - Wiley Online Library
The plastid genome of plants is the smallest and most gene‐rich of the three genomes in
each cell and the one generally present in the highest copy number. As a result, obtaining …

Diversification of flowering plants in space and time

D Dimitrov, X Xu, X Su, N Shrestha, Y Liu… - Nature …, 2023 - nature.com
The rapid diversification and high species richness of flowering plants is regarded as
'Darwin's second abominable mystery'. Today the global spatiotemporal pattern of plant …

Strategies for complete plastid genome sequencing

AD Twyford, RW Ness - Molecular ecology resources, 2017 - Wiley Online Library
Plastid sequencing is an essential tool in the study of plant evolution. This high‐copy
organelle is one of the most technically accessible regions of the genome, and its sequence …

Challenges and opportunities of airborne metagenomics

H Behzad, T Gojobori, K Mineta - Genome biology and evolution, 2015 - academic.oup.com
Recent metagenomic studies of environments, such as marine and soil, have significantly
enhanced our understanding of the diverse microbial communities living in these habitats …

Analysis of six chloroplast genomes provides insight into the evolution of Chrysosplenium (Saxifragaceae)

Z Wu, R Liao, T Yang, X Dong, D Lan, R Qin, H Liu - BMC genomics, 2020 - Springer
Abstract Background Chrysosplenium L.(Saxifragaceae) is a genus of plants widely
distributed in Northern Hemisphere and usually found in moist, shaded valleys and …

Chloroplast Genomes of Two Species of Cypripedium: Expanded Genome Size and Proliferation of AT-Biased Repeat Sequences

YY Guo, JX Yang, HK Li, HS Zhao - Frontiers in Plant Science, 2021 - frontiersin.org
The size of the chloroplast genome (plastome) of autotrophic angiosperms is generally
conserved. However, the chloroplast genomes of some lineages are greatly expanded …

Chloroplast genomes of four Carex species: Long repetitive sequences trigger dramatic changes in chloroplast genome structure

S Xu, K Teng, H Zhang, K Gao, J Wu, L Duan… - Frontiers in Plant …, 2023 - frontiersin.org
The chloroplast genomes of angiosperms usually have a stable circular quadripartite
structure that exhibits high consistency in genome size and gene order. As one of the most …