Computational nuclei segmentation methods in digital pathology: a survey

T Hayakawa, VBS Prasath, H Kawanaka… - … Methods in Engineering, 2021 - Springer
Pathology is an important field in modern medicine. In particular, the step of nuclei
segmentation is an important step in cancer analysis, diagnosis, and grading because …

A Comprehensive Overview of Computational Nuclei Segmentation Methods in Digital Pathology

V Magoulianitis, CA Alexander, CCJ Kuo - arXiv preprint arXiv:2308.08112, 2023 - arxiv.org
In the cancer diagnosis pipeline, digital pathology plays an instrumental role in the
identification, staging, and grading of malignant areas on biopsy tissue specimens. High …

Deep learning based Nucleus Classification in pancreas histological images

YH Chang, G Thibault, O Madin, V Azimi… - 2017 39th annual …, 2017 - ieeexplore.ieee.org
Tumor specimens contain a variety of healthy cells as well as cancerous cells, and this
heterogeneity underlies resistance to various cancer therapies. But this problem has not …

Cyclic multiplexed-immunofluorescence (cmIF), a highly multiplexed method for single-cell analysis

J Eng, G Thibault, SW Luoh, JW Gray… - … for Immunotherapy of …, 2020 - Springer
Immunotherapy harnesses the power of the adaptive immune system and has revolutionized
the field of oncotherapy, as novel therapeutic strategies have been introduced into clinical …

Robust cell detection and segmentation for image cytometry reveal Th17 cell heterogeneity

T Tsujikawa, G Thibault, V Azimi… - Cytometry Part …, 2019 - Wiley Online Library
Image cytometry enables quantitative cell characterization with preserved tissue
architecture; thus, it has been highlighted in the advancement of multiplex …

Computational measurement of tumor immune microenvironment in gastric adenocarcinomas

YH Chang, YJ Heo, J Cho, SY Song, J Lee, KM Kim - Scientific Reports, 2018 - nature.com
The use of four groups of tumor immune microenvironments (TME) based on PD-L1 and
tumor-infiltrating T lymphocytes (TIL) is a reliable biomarker for anti-PD-1/PD-L1 inhibitor …

Breast cancer histopathology image analysis pipeline for tumor purity estimation

V Azimi, YH Chang, G Thibault, J Smith… - 2017 IEEE 14th …, 2017 - ieeexplore.ieee.org
The translation of genomic sequencing technology to the clinic has greatly advanced
personalized medicine. However, the presence of normal cells in tumors is a confounding …

Statistical Analysis of Quantitative Cancer Imaging Data

S Mohammed, M Masotti, N Osher… - Statistics and Data …, 2024 - Taylor & Francis
Recent advances in types and extant of medical imaging technologies has led to
proliferation of multimodal quantitative imaging data in cancer. Quantitative medical imaging …

A Two-Stage Approach for Segmenting Spatial Point Patterns Applied to Multiplex Imaging

A Sheng, BJ Reich, AM Staicu, SN Krishnan… - arXiv preprint arXiv …, 2024 - arxiv.org
Recent advances in multiplex imaging have enabled researchers to locate different types of
cells within a tissue sample. This is especially relevant for tumor immunology, as clinical …

Integration of spatial distribution in imaging-genetics

V Subramanian, W Tang, B Chidester, J Ma… - … Image Computing and …, 2018 - Springer
To better understand diseases such as cancer, it is crucial for computational inference to
quantify the spatial distribution of various cell types within a tumor. To this end, we used …